Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC018630.3-201ENST00000542637 96 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.9□□□□□ -2.11
PTPN6P29350 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.9□□□□□ -2.11
PTPN6P29350 DEFB122-202ENST00000569013 197 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.9□□□□□ -2.11
PTPN6P29350 MIR3935-201ENST00000583472 104 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 AC104073.3-201ENST00000610942 955 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.9□□□□□ -2.11
PTPN6P29350 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.9□□□□□ -2.11
PTPN6P29350 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
PTPN6P29350 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
PTPN6P29350 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
PTPN6P29350 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.89□□□□□ -2.11
PTPN6P29350 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
PTPN6P29350 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PTPN6P29350 SNORD116-2-201ENST00000384274 95 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 RNU6-43P-201ENST00000384302 107 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 SNORD116-6-201ENST00000384711 96 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 SNORD37.1-201ENST00000390968 65 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 MIR1289-2-201ENST00000408360 111 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 RNU2-2P-201ENST00000410396 191 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 AL117339.3-201ENST00000418733 162 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.89□□□□□ -2.11
PTPN6P29350 CBX3P6-201ENST00000430257 527 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 VN1R108P-201ENST00000431580 830 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 HMGN2P3-201ENST00000433603 273 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 HMGN2P5-201ENST00000436882 273 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.89□□□□□ -2.11
PTPN6P29350 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.89□□□□□ -2.11
PTPN6P29350 PRELID3BP1-201ENST00000457142 540 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.89□□□□□ -2.11
PTPN6P29350 TPT1P7-201ENST00000458300 517 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 AC022447.4-201ENST00000504053 364 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.89□□□□□ -2.11
PTPN6P29350 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.89□□□□□ -2.11
PTPN6P29350 AC103996.1-201ENST00000555468 102 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.89□□□□□ -2.11
PTPN6P29350 MTND1P15-201ENST00000579262 949 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.89□□□□□ -2.11
PTPN6P29350 MIR4769-201ENST00000584126 77 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 VN1R107P-201ENST00000601784 209 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 RNU6-85P-201ENST00000605989 107 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PTPN6P29350 U2.15-201ENST00000611544 191 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 U2.16-201ENST00000613119 191 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 U2.12-201ENST00000613778 191 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 U2.20-201ENST00000613956 192 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 U2.9-201ENST00000615427 191 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 U2.11-201ENST00000616345 191 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 U2.2-201ENST00000616535 191 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 AL132822.1-201ENST00000617063 513 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 U2.3-201ENST00000617785 191 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 U2.19-201ENST00000618602 191 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 RNU2-1-201ENST00000618664 191 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 U2.6-201ENST00000619225 191 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 U2.5-201ENST00000619465 191 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 U2.10-201ENST00000620268 191 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 DUXAP9-208ENST00000622815 614 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 SNORD98-201ENST00000636377 67 ntBASIC1.89□□□□□ -2.11
PTPN6P29350 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PTPN6P29350 RNU6-1141P-201ENST00000364520 107 ntBASIC1.88□□□□□ -2.11
PTPN6P29350 BTF3L4P2-201ENST00000392798 346 ntBASIC1.88□□□□□ -2.11
PTPN6P29350 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.88□□□□□ -2.11
PTPN6P29350 AC244636.1-201ENST00000421152 228 ntBASIC1.88□□□□□ -2.11
PTPN6P29350 AC010975.2-201ENST00000427781 588 ntBASIC1.88□□□□□ -2.11
PTPN6P29350 AL445646.1-201ENST00000431784 216 ntBASIC1.88□□□□□ -2.11
PTPN6P29350 IFNA20P-201ENST00000436840 528 ntBASIC1.88□□□□□ -2.11
PTPN6P29350 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.88□□□□□ -2.11
PTPN6P29350 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PTPN6P29350 AL121601.2-201ENST00000438019 707 ntBASIC1.88□□□□□ -2.11
PTPN6P29350 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.88□□□□□ -2.11
PTPN6P29350 MTCO2P18-201ENST00000457151 658 ntBASIC1.88□□□□□ -2.11
PTPN6P29350 RPL23AP42-201ENST00000471152 471 ntBASIC1.88□□□□□ -2.11
PTPN6P29350 RPL21P99-201ENST00000480369 423 ntBASIC1.88□□□□□ -2.11
PTPN6P29350 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.88□□□□□ -2.11
PTPN6P29350 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.88□□□□□ -2.11
PTPN6P29350 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.88□□□□□ -2.11
PTPN6P29350 AL034555.1-201ENST00000604816 211 ntBASIC1.88□□□□□ -2.11
PTPN6P29350 AC018889.1-201ENST00000605372 397 ntBASIC1.88□□□□□ -2.11
PTPN6P29350 AC098657.3-201ENST00000620434 263 ntBASIC1.88□□□□□ -2.11
PTPN6P29350 AC139792.3-201ENST00000623525 224 ntBASIC1.88□□□□□ -2.11
PTPN6P29350 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
PTPN6P29350 RNA5SP219-201ENST00000390940 113 ntBASIC1.87□□□□□ -2.11
PTPN6P29350 RPS29P13-201ENST00000402041 169 ntBASIC1.87□□□□□ -2.11
PTPN6P29350 SUMO2P12-201ENST00000405924 140 ntBASIC1.87□□□□□ -2.11
PTPN6P29350 RNU2-40P-201ENST00000410833 196 ntBASIC1.87□□□□□ -2.11
PTPN6P29350 AL663109.1-201ENST00000411498 844 ntBASIC1.87□□□□□ -2.11
PTPN6P29350 AC244670.1-201ENST00000436879 112 ntBASIC1.87□□□□□ -2.11
PTPN6P29350 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.87□□□□□ -2.11
PTPN6P29350 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.87□□□□□ -2.11
PTPN6P29350 AC009646.1-201ENST00000510455 318 ntBASIC1.87□□□□□ -2.11
PTPN6P29350 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.87□□□□□ -2.11
PTPN6P29350 AP003034.1-201ENST00000534621 422 ntBASIC1.87□□□□□ -2.11
PTPN6P29350 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.87□□□□□ -2.11
PTPN6P29350 HSPE1P4-201ENST00000550617 308 ntBASIC1.87□□□□□ -2.11
PTPN6P29350 MIR3136-201ENST00000583498 78 ntBASIC1.87□□□□□ -2.11
PTPN6P29350 NBR2-204ENST00000587322 63 ntBASIC1.87□□□□□ -2.11
PTPN6P29350 AC087683.1-201ENST00000591187 441 ntBASIC1.87□□□□□ -2.11
PTPN6P29350 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms