Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFX1P22670 UQCRBP2-201ENST00000447827 297 ntBASIC4.47□□□□□ -1.69
RFX1P22670 COX6CP14-201ENST00000469580 174 ntBASIC4.47□□□□□ -1.69
RFX1P22670 AC006445.1-201ENST00000491925 405 ntBASIC4.47□□□□□ -1.69
RFX1P22670 AC099522.1-202ENST00000514718 367 ntBASIC4.47□□□□□ -1.69
RFX1P22670 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.47□□□□□ -1.69
RFX1P22670 CBX3P4-201ENST00000538909 354 ntBASIC4.47□□□□□ -1.69
RFX1P22670 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.47□□□□□ -1.69
RFX1P22670 AC055872.1-201ENST00000570978 278 ntBASIC4.47□□□□□ -1.69
RFX1P22670 AC084757.4-201ENST00000616350 526 ntBASIC4.47□□□□□ -1.69
RFX1P22670 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.47□□□□□ -1.69
RFX1P22670 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFX1P22670 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.47□□□□□ -1.69
RFX1P22670 OTUD4P1-201ENST00000237841 3067 ntBASIC4.47□□□□□ -1.69
RFX1P22670 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RFX1P22670 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RFX1P22670 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
RFX1P22670 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
RFX1P22670 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
RFX1P22670 RNU4-15P-201ENST00000362613 141 ntBASIC4.46□□□□□ -1.7
RFX1P22670 RNY4P28-201ENST00000365281 93 ntBASIC4.46□□□□□ -1.7
RFX1P22670 SNORA18.3-201ENST00000384122 132 ntBASIC4.46□□□□□ -1.7
RFX1P22670 Y_RNA.498-201ENST00000384460 102 ntBASIC4.46□□□□□ -1.7
RFX1P22670 RPL19P1-201ENST00000411635 428 ntBASIC4.46□□□□□ -1.7
RFX1P22670 RNU6-625P-201ENST00000459412 107 ntBASIC4.46□□□□□ -1.7
RFX1P22670 AC091179.3-201ENST00000474761 144 ntBASIC4.46□□□□□ -1.7
RFX1P22670 RPL23AP70-201ENST00000483361 460 ntBASIC4.46□□□□□ -1.7
RFX1P22670 RPL29P14-201ENST00000495837 428 ntBASIC4.46□□□□□ -1.7
RFX1P22670 IGKV2-38-201ENST00000517443 247 ntBASIC4.46□□□□□ -1.7
RFX1P22670 AC022655.2-201ENST00000577280 318 ntBASIC4.46□□□□□ -1.7
RFX1P22670 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.46□□□□□ -1.7
RFX1P22670 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.46□□□□□ -1.7
RFX1P22670 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFX1P22670 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.46□□□□□ -1.7
RFX1P22670 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RFX1P22670 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RFX1P22670 AC000403.1-201ENST00000613696 3585 ntBASIC4.46□□□□□ -1.7
RFX1P22670 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFX1P22670 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RFX1P22670 MIR411-201ENST00000362239 96 ntBASIC4.45□□□□□ -1.7
RFX1P22670 RNU6-655P-201ENST00000362858 107 ntBASIC4.45□□□□□ -1.7
RFX1P22670 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.45□□□□□ -1.7
RFX1P22670 Y_RNA.275-201ENST00000364726 110 ntBASIC4.45□□□□□ -1.7
RFX1P22670 Y_RNA.383-201ENST00000383855 97 ntBASIC4.45□□□□□ -1.7
RFX1P22670 RNU6-514P-201ENST00000384208 107 ntBASIC4.45□□□□□ -1.7
RFX1P22670 RNU6-886P-201ENST00000384319 105 ntBASIC4.45□□□□□ -1.7
RFX1P22670 AL512633.1-201ENST00000399931 655 ntBASIC4.45□□□□□ -1.7
RFX1P22670 SNORA3C-201ENST00000408792 125 ntBASIC4.45□□□□□ -1.7
RFX1P22670 RNU4-61P-201ENST00000411243 107 ntBASIC4.45□□□□□ -1.7
RFX1P22670 ELOCP21-201ENST00000412558 336 ntBASIC4.45□□□□□ -1.7
RFX1P22670 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.45□□□□□ -1.7
RFX1P22670 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RFX1P22670 POLR2KP2-201ENST00000438155 177 ntBASIC4.45□□□□□ -1.7
RFX1P22670 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.45□□□□□ -1.7
RFX1P22670 AC005042.3-201ENST00000453230 174 ntBASIC4.45□□□□□ -1.7
RFX1P22670 AL031183.1-201ENST00000457667 207 ntBASIC4.45□□□□□ -1.7
RFX1P22670 AP001324.2-201ENST00000461163 319 ntBASIC4.45□□□□□ -1.7
RFX1P22670 AL121594.1-201ENST00000475906 575 ntBASIC4.45□□□□□ -1.7
RFX1P22670 AC012603.1-201ENST00000606424 528 ntBASIC4.45□□□□□ -1.7
RFX1P22670 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
RFX1P22670 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RFX1P22670 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.45□□□□□ -1.7
RFX1P22670 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
RFX1P22670 AC026241.1-201ENST00000517873 2142 ntBASIC4.45□□□□□ -1.7
RFX1P22670 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.44□□□□□ -1.7
RFX1P22670 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RFX1P22670 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFX1P22670 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
RFX1P22670 SNORA60-201ENST00000362396 134 ntBASIC4.44□□□□□ -1.7
RFX1P22670 SNORA63.1-201ENST00000362493 131 ntBASIC4.44□□□□□ -1.7
RFX1P22670 U3.9-201ENST00000363823 204 ntBASIC4.44□□□□□ -1.7
RFX1P22670 SNORA14A-201ENST00000364773 135 ntBASIC4.44□□□□□ -1.7
RFX1P22670 Y_RNA.292-201ENST00000364904 97 ntBASIC4.44□□□□□ -1.7
RFX1P22670 Y_RNA.418-201ENST00000384029 102 ntBASIC4.44□□□□□ -1.7
RFX1P22670 MIR449B-201ENST00000384995 97 ntBASIC4.44□□□□□ -1.7
RFX1P22670 MIR483-201ENST00000385070 76 ntBASIC4.44□□□□□ -1.7
RFX1P22670 SNORA46.1-201ENST00000391069 153 ntBASIC4.44□□□□□ -1.7
RFX1P22670 Y_RNA.626-201ENST00000411288 95 ntBASIC4.44□□□□□ -1.7
RFX1P22670 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.44□□□□□ -1.7
RFX1P22670 AC104332.1-201ENST00000440471 797 ntBASIC4.44□□□□□ -1.7
RFX1P22670 IFNA11P-201ENST00000446352 526 ntBASIC4.44□□□□□ -1.7
RFX1P22670 NDUFB4P10-201ENST00000452541 359 ntBASIC4.44□□□□□ -1.7
RFX1P22670 RPL23AP3-201ENST00000453844 468 ntBASIC4.44□□□□□ -1.7
RFX1P22670 AC103975.1-201ENST00000482506 483 ntBASIC4.44□□□□□ -1.7
RFX1P22670 AC091959.1-201ENST00000495857 238 ntBASIC4.44□□□□□ -1.7
RFX1P22670 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.44□□□□□ -1.7
RFX1P22670 SNORA27.4-201ENST00000516650 95 ntBASIC4.44□□□□□ -1.7
RFX1P22670 RNU7-143P-201ENST00000516781 65 ntBASIC4.44□□□□□ -1.7
RFX1P22670 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.44□□□□□ -1.7
RFX1P22670 AC027176.1-201ENST00000560204 514 ntBASIC4.44□□□□□ -1.7
RFX1P22670 MIR5685-201ENST00000579080 79 ntBASIC4.44□□□□□ -1.7
RFX1P22670 MIR4282-201ENST00000583613 67 ntBASIC4.44□□□□□ -1.7
RFX1P22670 MIR7151-201ENST00000617477 60 ntBASIC4.44□□□□□ -1.7
RFX1P22670 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.44□□□□□ -1.7
RFX1P22670 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.43□□□□□ -1.7
RFX1P22670 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFX1P22670 SNORA71.3-201ENST00000362582 128 ntBASIC4.43□□□□□ -1.7
RFX1P22670 Y_RNA.82-201ENST00000363000 102 ntBASIC4.43□□□□□ -1.7
RFX1P22670 Y_RNA.92-201ENST00000363043 102 ntBASIC4.43□□□□□ -1.7
RFX1P22670 Y_RNA.235-201ENST00000364412 102 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms