Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 RNU2-27P-201ENST00000516185 142 ntBASIC4.21□□□□□ -1.74
PTPRAP18433 MIR3145-201ENST00000580727 82 ntBASIC4.21□□□□□ -1.74
PTPRAP18433 YPEL5P2-201ENST00000605553 359 ntBASIC4.21□□□□□ -1.74
PTPRAP18433 AC010999.1-201ENST00000611856 324 ntBASIC4.21□□□□□ -1.74
PTPRAP18433 AC092628.2-201ENST00000622492 339 ntBASIC4.21□□□□□ -1.74
PTPRAP18433 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPRAP18433 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPRAP18433 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.21□□□□□ -1.74
PTPRAP18433 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.21□□□□□ -1.74
PTPRAP18433 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPRAP18433 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PTPRAP18433 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPRAP18433 AL109809.4-201ENST00000603520 2185 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 RNU6-653P-201ENST00000363074 106 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 Y_RNA.272-201ENST00000364696 102 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 SNORA72.2-201ENST00000365028 127 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 RNU6-211P-201ENST00000384047 107 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 MIR513A2-201ENST00000385249 127 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 RN7SKP61-201ENST00000410642 295 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPRAP18433 AC017083.1-201ENST00000428093 483 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPRAP18433 HMGB3P3-201ENST00000510526 400 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.2□□□□□ -1.74
PTPRAP18433 RNU6-191P-201ENST00000516295 94 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 RNU6-1282P-201ENST00000516735 96 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 SNORA31.23-201ENST00000517219 133 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.2□□□□□ -1.74
PTPRAP18433 MIR5692C2-201ENST00000577959 77 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPRAP18433 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 LINC00901.1-201ENST00000617252 152 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 snoU18.1-201ENST00000629629 71 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 MTND1P7-201ENST00000632801 297 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.2□□□□□ -1.74
PTPRAP18433 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PTPRAP18433 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.2□□□□□ -1.74
PTPRAP18433 LINC02471-203ENST00000641941 4752 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 AC087190.4-201ENST00000574616 8334 ntBASIC4.2□□□□□ -1.74
PTPRAP18433 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PTPRAP18433 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
PTPRAP18433 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.19□□□□□ -1.74
PTPRAP18433 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PTPRAP18433 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
PTPRAP18433 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PTPRAP18433 MIR448-201ENST00000362131 111 ntBASIC4.19□□□□□ -1.74
PTPRAP18433 SNORD17-201ENST00000390930 237 ntBASIC4.19□□□□□ -1.74
PTPRAP18433 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPRAP18433 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.19□□□□□ -1.74
PTPRAP18433 U3.44-201ENST00000458938 192 ntBASIC4.19□□□□□ -1.74
PTPRAP18433 RNU6-625P-201ENST00000459412 107 ntBASIC4.19□□□□□ -1.74
PTPRAP18433 AC078817.1-201ENST00000492623 435 ntBASIC4.19□□□□□ -1.74
PTPRAP18433 AC078918.1-201ENST00000498515 228 ntBASIC4.19□□□□□ -1.74
PTPRAP18433 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PTPRAP18433 AC233702.2-202ENST00000562547 291 ntBASIC4.19□□□□□ -1.74
PTPRAP18433 AL359198.2-201ENST00000611836 194 ntBASIC4.19□□□□□ -1.74
PTPRAP18433 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPRAP18433 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PTPRAP18433 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPRAP18433 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPRAP18433 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPRAP18433 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPRAP18433 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PTPRAP18433 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPRAP18433 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PTPRAP18433 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PTPRAP18433 AC110491.1-201ENST00000562191 2010 ntBASIC4.18□□□□□ -1.74
PTPRAP18433 AC010733.2-201ENST00000589496 5702 ntBASIC4.18□□□□□ -1.74
PTPRAP18433 Y_RNA.101-201ENST00000363154 102 ntBASIC4.18□□□□□ -1.74
PTPRAP18433 RNU6-22P-201ENST00000384355 107 ntBASIC4.18□□□□□ -1.74
PTPRAP18433 Y_RNA.571-201ENST00000384753 98 ntBASIC4.18□□□□□ -1.74
PTPRAP18433 Y_RNA.580-201ENST00000391004 95 ntBASIC4.18□□□□□ -1.74
PTPRAP18433 AC112220.1-201ENST00000434628 355 ntBASIC4.18□□□□□ -1.74
PTPRAP18433 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPRAP18433 HMGB3P8-201ENST00000449709 577 ntBASIC4.18□□□□□ -1.74
PTPRAP18433 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPRAP18433 AL049830.2-201ENST00000480072 201 ntBASIC4.18□□□□□ -1.74
PTPRAP18433 AC140059.1-201ENST00000489238 361 ntBASIC4.18□□□□□ -1.74
PTPRAP18433 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPRAP18433 AC021231.3-201ENST00000558497 370 ntBASIC4.18□□□□□ -1.74
PTPRAP18433 AC068254.2-201ENST00000623938 3577 ntBASIC4.18□□□□□ -1.74
PTPRAP18433 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PTPRAP18433 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPRAP18433 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPRAP18433 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
PTPRAP18433 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTPRAP18433 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPRAP18433 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPRAP18433 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPRAP18433 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
PTPRAP18433 RNU6-1290P-201ENST00000362957 109 ntBASIC4.17□□□□□ -1.74
PTPRAP18433 Y_RNA.111-201ENST00000363248 100 ntBASIC4.17□□□□□ -1.74
PTPRAP18433 RNU6-1027P-201ENST00000383998 107 ntBASIC4.17□□□□□ -1.74
PTPRAP18433 Y_RNA.497-201ENST00000384447 98 ntBASIC4.17□□□□□ -1.74
PTPRAP18433 MIR634-201ENST00000385208 97 ntBASIC4.17□□□□□ -1.74
PTPRAP18433 SNORA11.2-201ENST00000408318 127 ntBASIC4.17□□□□□ -1.74
PTPRAP18433 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.17□□□□□ -1.74
PTPRAP18433 FTH1P6-201ENST00000430768 320 ntBASIC4.17□□□□□ -1.74
PTPRAP18433 NDUFB1P1-201ENST00000435191 180 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 194.4 ms