Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 RNU1-131P-201ENST00000458943 161 ntBASIC1.08□□□□□ -2.24
CTLA4P16410 AC099513.1-201ENST00000490423 301 ntBASIC1.08□□□□□ -2.24
CTLA4P16410 AC098862.1-201ENST00000504991 413 ntBASIC1.08□□□□□ -2.24
CTLA4P16410 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.08□□□□□ -2.24
CTLA4P16410 RNU6-377P-201ENST00000515965 102 ntBASIC1.08□□□□□ -2.24
CTLA4P16410 RN7SKP265-201ENST00000516448 223 ntBASIC1.08□□□□□ -2.24
CTLA4P16410 SNORA31.17-201ENST00000516953 127 ntBASIC1.08□□□□□ -2.24
CTLA4P16410 AP001893.2-201ENST00000526949 202 ntBASIC1.08□□□□□ -2.24
CTLA4P16410 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.08□□□□□ -2.24
CTLA4P16410 AC084364.2-201ENST00000546924 395 ntBASIC1.08□□□□□ -2.24
CTLA4P16410 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.08□□□□□ -2.24
CTLA4P16410 MIR3136-201ENST00000583498 78 ntBASIC1.08□□□□□ -2.24
CTLA4P16410 AC104984.5-201ENST00000586878 94 ntBASIC1.08□□□□□ -2.24
CTLA4P16410 AC098848.2-201ENST00000588023 330 ntBASIC1.08□□□□□ -2.24
CTLA4P16410 AC005786.1-201ENST00000588553 154 ntBASIC1.08□□□□□ -2.24
CTLA4P16410 AL034555.1-201ENST00000604816 211 ntBASIC1.08□□□□□ -2.24
CTLA4P16410 AL050303.3-201ENST00000613704 284 ntBASIC1.08□□□□□ -2.24
CTLA4P16410 AC097372.5-201ENST00000623665 376 ntBASIC1.08□□□□□ -2.24
CTLA4P16410 AP000560.1-201ENST00000624150 1937 ntBASIC1.08□□□□□ -2.24
CTLA4P16410 RNU6-1287P-201ENST00000362914 107 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 SNORD114-6-201ENST00000364393 72 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 Y_RNA.367-201ENST00000365544 101 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CTLA4P16410 RNU6-142P-201ENST00000384019 107 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 RNU5A-2P-201ENST00000384337 116 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 RNU6-1060P-201ENST00000384664 107 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.07□□□□□ -2.24
CTLA4P16410 BTF3P4-201ENST00000418852 495 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.07□□□□□ -2.24
CTLA4P16410 AL669831.1-202ENST00000428504 417 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.07□□□□□ -2.24
CTLA4P16410 GTF2IP13-201ENST00000438487 386 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 AC245517.4-201ENST00000448601 281 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 AC079448.1-201ENST00000449377 373 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 HMGN2P18-201ENST00000450680 270 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 MTCYBP1-201ENST00000454315 1119 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 snoU13.9-201ENST00000458927 103 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 AC010409.1-201ENST00000487382 476 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 AC145146.1-201ENST00000496370 254 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 MTND1P22-201ENST00000510572 951 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.07□□□□□ -2.24
CTLA4P16410 AC109479.2-201ENST00000517842 174 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 AC106038.2-201ENST00000520706 568 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.07□□□□□ -2.24
CTLA4P16410 AP001372.4-201ENST00000524889 472 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 AC023050.3-201ENST00000541142 333 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 AC008269.2-201ENST00000561915 1105 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 SUB1P4-201ENST00000566062 339 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 MIR4775-201ENST00000581168 75 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 BNIP3P16-201ENST00000589779 534 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 VN1R107P-201ENST00000601784 209 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 AP001485.1-201ENST00000604799 199 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 AC123912.5-201ENST00000605470 343 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.07□□□□□ -2.24
CTLA4P16410 AC024933.1-201ENST00000608472 348 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 AC104073.3-201ENST00000610942 955 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 AL590240.4-201ENST00000616908 390 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 AL603839.4-201ENST00000624658 1005 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 LINC02555-201ENST00000563933 1951 ntBASIC1.07□□□□□ -2.24
CTLA4P16410 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-37P-201ENST00000362692 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 Y_RNA.140-201ENST00000363474 103 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-11P-201ENST00000364234 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-1141P-201ENST00000364520 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNY4P34-201ENST00000364779 95 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-715P-201ENST00000365204 103 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-108P-201ENST00000365558 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-25P-201ENST00000383873 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-1-201ENST00000383898 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-26P-201ENST00000383985 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-48P-201ENST00000384161 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-36P-201ENST00000384172 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-4P-201ENST00000384205 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-74P-201ENST00000384235 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-5P-201ENST00000384238 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-3P-201ENST00000384314 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-16P-201ENST00000384385 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-15P-201ENST00000384534 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-2-201ENST00000384627 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-29P-201ENST00000384637 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-9-201ENST00000384776 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-33P-201ENST00000384793 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 MIR454-201ENST00000390180 115 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-482P-201ENST00000391068 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 AL031577.2-201ENST00000404133 280 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-293P-201ENST00000411259 106 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 AP1B1P2-201ENST00000416196 106 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 GPR143P-201ENST00000434155 205 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.06□□□□□ -2.24
CTLA4P16410 AC009961.2-201ENST00000435771 251 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.06□□□□□ -2.24
CTLA4P16410 MTND1P30-201ENST00000441241 901 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 AC013470.1-201ENST00000453438 462 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.06□□□□□ -2.24
CTLA4P16410 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.06□□□□□ -2.24
CTLA4P16410 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.06□□□□□ -2.24
CTLA4P16410 AC005741.1-201ENST00000511094 432 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNA5SP445-201ENST00000515889 115 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms