Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 MIR1261-201ENST00000408659 82 ntBASIC2.23□□□□□ -2.05
PDGFRAP16234 RNU2-32P-201ENST00000411193 191 ntBASIC2.23□□□□□ -2.05
PDGFRAP16234 AC078809.1-201ENST00000427601 140 ntBASIC2.23□□□□□ -2.05
PDGFRAP16234 RPL21P99-201ENST00000480369 423 ntBASIC2.23□□□□□ -2.05
PDGFRAP16234 HMGB1P35-201ENST00000503360 598 ntBASIC2.23□□□□□ -2.05
PDGFRAP16234 RNU6-506P-201ENST00000516553 94 ntBASIC2.23□□□□□ -2.05
PDGFRAP16234 SNORA31.25-201ENST00000517242 134 ntBASIC2.23□□□□□ -2.05
PDGFRAP16234 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.23□□□□□ -2.05
PDGFRAP16234 AC087854.1-201ENST00000519706 414 ntBASIC2.23□□□□□ -2.05
PDGFRAP16234 MIR3136-201ENST00000583498 78 ntBASIC2.23□□□□□ -2.05
PDGFRAP16234 MIR5002-201ENST00000584713 97 ntBASIC2.23□□□□□ -2.05
PDGFRAP16234 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.23□□□□□ -2.05
PDGFRAP16234 AL162413.1-201ENST00000603198 110 ntBASIC2.23□□□□□ -2.05
PDGFRAP16234 SNORA16B-201ENST00000364674 135 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 SNORA64-201ENST00000384674 134 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 RNU6-1106P-201ENST00000390845 107 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 RN7SKP61-201ENST00000410642 295 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 HMGB3P2-201ENST00000411913 584 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 AC244670.1-201ENST00000436879 112 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 SEPT14P3-201ENST00000439401 183 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.22□□□□□ -2.05
PDGFRAP16234 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.22□□□□□ -2.05
PDGFRAP16234 AL732372.2-207ENST00000445840 183 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 AL031659.1-201ENST00000447075 539 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 AL513124.1-201ENST00000450410 614 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 SEPT14P2-201ENST00000453405 183 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 RNU6-1208P-201ENST00000459588 107 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.22□□□□□ -2.05
PDGFRAP16234 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PDGFRAP16234 SEPT14P4-201ENST00000513445 186 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.22□□□□□ -2.05
PDGFRAP16234 RNU6-1281P-201ENST00000516223 105 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 RNU6-667P-201ENST00000517186 102 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 FO082796.1-201ENST00000523795 183 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 AC022616.8-201ENST00000533569 253 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.22□□□□□ -2.05
PDGFRAP16234 SNRPGP17-201ENST00000603780 214 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 AC092807.2-201ENST00000609367 243 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 AL132822.1-201ENST00000617063 513 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 SDR42E1P4-201ENST00000620894 481 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 AC068137.3-201ENST00000639191 341 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 AL359851.1-201ENST00000569460 4997 ntBASIC2.22□□□□□ -2.05
PDGFRAP16234 RNU6-483P-201ENST00000384088 108 ntBASIC2.21□□□□□ -2.06
PDGFRAP16234 RNU6-611P-201ENST00000384276 104 ntBASIC2.21□□□□□ -2.06
PDGFRAP16234 SNORA67.3-201ENST00000384366 140 ntBASIC2.21□□□□□ -2.06
PDGFRAP16234 RNU6-780P-201ENST00000391030 104 ntBASIC2.21□□□□□ -2.06
PDGFRAP16234 AL023284.1-201ENST00000403956 276 ntBASIC2.21□□□□□ -2.06
PDGFRAP16234 AL356379.1-201ENST00000414105 126 ntBASIC2.21□□□□□ -2.06
PDGFRAP16234 RPL23AP95-201ENST00000426806 265 ntBASIC2.21□□□□□ -2.06
PDGFRAP16234 CBX3P6-201ENST00000430257 527 ntBASIC2.21□□□□□ -2.06
PDGFRAP16234 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.21□□□□□ -2.06
PDGFRAP16234 AC079804.2-201ENST00000490376 200 ntBASIC2.21□□□□□ -2.06
PDGFRAP16234 RPL38P4-201ENST00000502376 214 ntBASIC2.21□□□□□ -2.06
PDGFRAP16234 AC107953.1-201ENST00000522216 297 ntBASIC2.21□□□□□ -2.06
PDGFRAP16234 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.21□□□□□ -2.06
PDGFRAP16234 AC026271.5-201ENST00000577873 130 ntBASIC2.21□□□□□ -2.06
PDGFRAP16234 AP001836.1-201ENST00000604675 523 ntBASIC2.21□□□□□ -2.06
PDGFRAP16234 AL034555.1-201ENST00000604816 211 ntBASIC2.21□□□□□ -2.06
PDGFRAP16234 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.21□□□□□ -2.06
PDGFRAP16234 AC022202.1-201ENST00000613515 211 ntBASIC2.21□□□□□ -2.06
PDGFRAP16234 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.21□□□□□ -2.06
PDGFRAP16234 SNORD98-201ENST00000636377 67 ntBASIC2.21□□□□□ -2.06
PDGFRAP16234 AP006437.1-201ENST00000641440 3685 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 Y_RNA.167-201ENST00000363735 109 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 Y_RNA.231-201ENST00000364358 102 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 RNU6-142P-201ENST00000384019 107 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 SNORD116-4-201ENST00000384733 96 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 SNORD73A-201ENST00000386062 65 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 SNORA46.1-201ENST00000391069 153 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 RNU6-908P-201ENST00000410160 94 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 Y_RNA.597-201ENST00000410463 100 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 RNU6-1068P-201ENST00000410958 103 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 RN7SKP284-201ENST00000411002 343 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.2□□□□□ -2.06
PDGFRAP16234 AL590556.1-201ENST00000423231 483 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 AL133396.1-201ENST00000432048 687 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 IFNA20P-201ENST00000436840 528 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 RNA5SP233-201ENST00000459153 113 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 AC055731.1-201ENST00000474387 401 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.2□□□□□ -2.06
PDGFRAP16234 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.2□□□□□ -2.06
PDGFRAP16234 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.2□□□□□ -2.06
PDGFRAP16234 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.2□□□□□ -2.06
PDGFRAP16234 AK6P1-201ENST00000540219 478 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.2□□□□□ -2.06
PDGFRAP16234 AL157687.1-201ENST00000554853 619 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 MIR4529-201ENST00000578110 78 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 MIR4287-201ENST00000579398 78 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 AL031274.2-201ENST00000599419 203 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 RNU6-89P-201ENST00000606519 100 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 DISC2.1-201ENST00000612827 205 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 AL162373.1-201ENST00000620433 407 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 AC121333.1-201ENST00000567488 2709 ntBASIC2.2□□□□□ -2.06
PDGFRAP16234 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PDGFRAP16234 RNU4-15P-201ENST00000362613 141 ntBASIC2.19□□□□□ -2.06
PDGFRAP16234 Y_RNA.372-201ENST00000365599 102 ntBASIC2.19□□□□□ -2.06
PDGFRAP16234 HMGN2P39-201ENST00000398005 273 ntBASIC2.19□□□□□ -2.06
PDGFRAP16234 AP000275.1-201ENST00000411943 390 ntBASIC2.19□□□□□ -2.06
PDGFRAP16234 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PDGFRAP16234 AL137159.1-201ENST00000452808 512 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms