Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MTND4P21-201ENST00000453886 1357 ntBASIC0.19□□□□□ -2.38
CFTRP13569 RNU6-1019P-201ENST00000364424 107 ntBASIC0.19□□□□□ -2.38
CFTRP13569 Y_RNA.332-201ENST00000365271 113 ntBASIC0.19□□□□□ -2.38
CFTRP13569 RNU6-1207P-201ENST00000384343 107 ntBASIC0.19□□□□□ -2.38
CFTRP13569 RNU6-1176P-201ENST00000390955 107 ntBASIC0.19□□□□□ -2.38
CFTRP13569 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.19□□□□□ -2.38
CFTRP13569 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.19□□□□□ -2.38
CFTRP13569 RAC1P6-201ENST00000423911 575 ntBASIC0.19□□□□□ -2.38
CFTRP13569 AC092423.1-201ENST00000430165 186 ntBASIC0.19□□□□□ -2.38
CFTRP13569 MTCO3P18-201ENST00000440206 761 ntBASIC0.19□□□□□ -2.38
CFTRP13569 GAPDHP17-201ENST00000449858 1001 ntBASIC0.19□□□□□ -2.38
CFTRP13569 RNU7-140P-201ENST00000459546 60 ntBASIC0.19□□□□□ -2.38
CFTRP13569 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.19□□□□□ -2.38
CFTRP13569 MTCO3P7-201ENST00000510008 774 ntBASIC0.19□□□□□ -2.38
CFTRP13569 AC009646.1-201ENST00000510455 318 ntBASIC0.19□□□□□ -2.38
CFTRP13569 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.19□□□□□ -2.38
CFTRP13569 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.19□□□□□ -2.38
CFTRP13569 AC078795.2-201ENST00000602835 1252 ntBASIC0.19□□□□□ -2.38
CFTRP13569 AC022022.2-201ENST00000602989 360 ntBASIC0.19□□□□□ -2.38
CFTRP13569 AC069114.2-201ENST00000604699 304 ntBASIC0.19□□□□□ -2.38
CFTRP13569 AL451064.1-201ENST00000607718 471 ntBASIC0.19□□□□□ -2.38
CFTRP13569 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.19□□□□□ -2.38
CFTRP13569 MTND4P14-201ENST00000435799 1354 ntBASIC0.18□□□□□ -2.38
CFTRP13569 RNU6-945P-201ENST00000383947 107 ntBASIC0.18□□□□□ -2.38
CFTRP13569 RPS3AP36-201ENST00000398190 775 ntBASIC0.18□□□□□ -2.38
CFTRP13569 RNA5SP111-201ENST00000411386 101 ntBASIC0.18□□□□□ -2.38
CFTRP13569 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.18□□□□□ -2.38
CFTRP13569 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.18□□□□□ -2.38
CFTRP13569 AC098869.1-201ENST00000481627 292 ntBASIC0.18□□□□□ -2.38
CFTRP13569 MTCO3P42-201ENST00000509488 518 ntBASIC0.18□□□□□ -2.38
CFTRP13569 MTCO3P39-201ENST00000514812 518 ntBASIC0.18□□□□□ -2.38
CFTRP13569 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.18□□□□□ -2.38
CFTRP13569 MIR4768-201ENST00000585270 74 ntBASIC0.18□□□□□ -2.38
CFTRP13569 BNIP3P30-201ENST00000601184 574 ntBASIC0.18□□□□□ -2.38
CFTRP13569 AC105148.1-201ENST00000604961 409 ntBASIC0.18□□□□□ -2.38
CFTRP13569 AC099654.9-201ENST00000637055 678 ntBASIC0.18□□□□□ -2.38
CFTRP13569 RNU2-23P-201ENST00000410545 195 ntBASIC0.17□□□□□ -2.38
CFTRP13569 MTCO2P12-201ENST00000427426 682 ntBASIC0.17□□□□□ -2.38
CFTRP13569 RPS15AP10-201ENST00000432472 382 ntBASIC0.17□□□□□ -2.38
CFTRP13569 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.17□□□□□ -2.38
CFTRP13569 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.17□□□□□ -2.38
CFTRP13569 SNORD79.1-201ENST00000516069 84 ntBASIC0.17□□□□□ -2.38
CFTRP13569 AC009902.1-201ENST00000519351 183 ntBASIC0.17□□□□□ -2.38
CFTRP13569 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CFTRP13569 AL357080.1-201ENST00000617394 239 ntBASIC0.17□□□□□ -2.38
CFTRP13569 RNU6-216P-201ENST00000363282 104 ntBASIC0.16□□□□□ -2.38
CFTRP13569 Y_RNA.185-201ENST00000363894 100 ntBASIC0.16□□□□□ -2.38
CFTRP13569 RNU6-487P-201ENST00000365430 104 ntBASIC0.16□□□□□ -2.38
CFTRP13569 RNU6-1054P-201ENST00000411293 104 ntBASIC0.16□□□□□ -2.38
CFTRP13569 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.16□□□□□ -2.38
CFTRP13569 RAB28P5-201ENST00000427490 651 ntBASIC0.16□□□□□ -2.38
CFTRP13569 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.16□□□□□ -2.38
CFTRP13569 snoU13.14-201ENST00000459372 104 ntBASIC0.16□□□□□ -2.38
CFTRP13569 AC048334.1-201ENST00000477975 159 ntBASIC0.16□□□□□ -2.38
CFTRP13569 AC114981.1-201ENST00000503897 678 ntBASIC0.16□□□□□ -2.38
CFTRP13569 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.16□□□□□ -2.38
CFTRP13569 AL442163.3-201ENST00000554110 156 ntBASIC0.16□□□□□ -2.38
CFTRP13569 AC012557.2-201ENST00000605919 418 ntBASIC0.16□□□□□ -2.38
CFTRP13569 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.16□□□□□ -2.38
CFTRP13569 AC092656.1-203ENST00000624134 423 ntBASIC0.16□□□□□ -2.38
CFTRP13569 SNORA63D-201ENST00000364359 132 ntBASIC0.16□□□□□ -2.38
CFTRP13569 RNU6-923P-201ENST00000364753 107 ntBASIC0.16□□□□□ -2.38
CFTRP13569 RNU6-1237P-201ENST00000384777 107 ntBASIC0.16□□□□□ -2.38
CFTRP13569 RAP1BP3-201ENST00000407180 549 ntBASIC0.16□□□□□ -2.38
CFTRP13569 COX6CP10-201ENST00000416832 224 ntBASIC0.16□□□□□ -2.38
CFTRP13569 AL008629.1-201ENST00000438615 184 ntBASIC0.16□□□□□ -2.38
CFTRP13569 RPEP5-201ENST00000441137 268 ntBASIC0.16□□□□□ -2.38
CFTRP13569 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.16□□□□□ -2.38
CFTRP13569 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.16□□□□□ -2.38
CFTRP13569 AC105758.1-201ENST00000506038 399 ntBASIC0.16□□□□□ -2.38
CFTRP13569 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.16□□□□□ -2.38
CFTRP13569 SNORD60.2-201ENST00000516883 86 ntBASIC0.16□□□□□ -2.38
CFTRP13569 AP001189.2-201ENST00000527320 189 ntBASIC0.16□□□□□ -2.38
CFTRP13569 MIR4667-201ENST00000578933 66 ntBASIC0.16□□□□□ -2.38
CFTRP13569 AC098483.2-201ENST00000603158 454 ntBASIC0.16□□□□□ -2.38
CFTRP13569 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.16□□□□□ -2.38
CFTRP13569 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.16□□□□□ -2.38
CFTRP13569 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
CFTRP13569 RNU6-353P-201ENST00000364266 108 ntBASIC0.15□□□□□ -2.39
CFTRP13569 RNU6-622P-201ENST00000384272 103 ntBASIC0.15□□□□□ -2.39
CFTRP13569 AC123900.1-201ENST00000420390 96 ntBASIC0.15□□□□□ -2.39
CFTRP13569 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.15□□□□□ -2.39
CFTRP13569 AC024589.1-201ENST00000512207 263 ntBASIC0.15□□□□□ -2.39
CFTRP13569 SNORA31.19-201ENST00000517079 126 ntBASIC0.15□□□□□ -2.39
CFTRP13569 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
CFTRP13569 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.15□□□□□ -2.39
CFTRP13569 BNIP3P9-201ENST00000603714 553 ntBASIC0.15□□□□□ -2.39
CFTRP13569 RNU6-212P-201ENST00000362642 104 ntBASIC0.14□□□□□ -2.39
CFTRP13569 AL590556.1-201ENST00000423231 483 ntBASIC0.14□□□□□ -2.39
CFTRP13569 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.14□□□□□ -2.39
CFTRP13569 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.14□□□□□ -2.39
CFTRP13569 MTCYBP1-201ENST00000454315 1119 ntBASIC0.14□□□□□ -2.39
CFTRP13569 AC113410.1-201ENST00000505029 247 ntBASIC0.14□□□□□ -2.39
CFTRP13569 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.14□□□□□ -2.39
CFTRP13569 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.14□□□□□ -2.39
CFTRP13569 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.14□□□□□ -2.39
CFTRP13569 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.14□□□□□ -2.39
CFTRP13569 AC138915.2-201ENST00000569776 97 ntBASIC0.14□□□□□ -2.39
CFTRP13569 MIR4666A-201ENST00000580160 79 ntBASIC0.14□□□□□ -2.39
CFTRP13569 BNIP3P26-201ENST00000600827 554 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms