Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 SNORD31B-201ENST00000364977 69 ntBASIC0.75□□□□□ -2.29
DEFA4P12838 SNORA29-201ENST00000384183 140 ntBASIC0.75□□□□□ -2.29
DEFA4P12838 RNU6-39P-201ENST00000384344 107 ntBASIC0.75□□□□□ -2.29
DEFA4P12838 Y_RNA.608-201ENST00000410647 95 ntBASIC0.75□□□□□ -2.29
DEFA4P12838 RPL21P111-201ENST00000418453 477 ntBASIC0.75□□□□□ -2.29
DEFA4P12838 AC069257.2-201ENST00000441819 155 ntBASIC0.75□□□□□ -2.29
DEFA4P12838 AL606662.1-201ENST00000445763 553 ntBASIC0.75□□□□□ -2.29
DEFA4P12838 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.75□□□□□ -2.29
DEFA4P12838 RPL31P3-201ENST00000458430 332 ntBASIC0.75□□□□□ -2.29
DEFA4P12838 OR2A41P-201ENST00000473586 105 ntBASIC0.75□□□□□ -2.29
DEFA4P12838 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.75□□□□□ -2.29
DEFA4P12838 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.75□□□□□ -2.29
DEFA4P12838 AC104136.1-201ENST00000512969 394 ntBASIC0.75□□□□□ -2.29
DEFA4P12838 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.75□□□□□ -2.29
DEFA4P12838 RNU5A-4P-201ENST00000516588 111 ntBASIC0.75□□□□□ -2.29
DEFA4P12838 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.75□□□□□ -2.29
DEFA4P12838 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.75□□□□□ -2.29
DEFA4P12838 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.75□□□□□ -2.29
DEFA4P12838 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.75□□□□□ -2.29
DEFA4P12838 RPL21P5-201ENST00000554662 472 ntBASIC0.75□□□□□ -2.29
DEFA4P12838 MIR4999-201ENST00000585029 91 ntBASIC0.75□□□□□ -2.29
DEFA4P12838 AC098848.2-201ENST00000588023 330 ntBASIC0.75□□□□□ -2.29
DEFA4P12838 AC073539.2-201ENST00000597113 165 ntBASIC0.75□□□□□ -2.29
DEFA4P12838 AC120349.3-201ENST00000624377 529 ntBASIC0.75□□□□□ -2.29
DEFA4P12838 AP002371.2-201ENST00000624450 503 ntBASIC0.75□□□□□ -2.29
DEFA4P12838 SNORD98-201ENST00000636377 67 ntBASIC0.75□□□□□ -2.29
DEFA4P12838 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.75□□□□□ -2.29
DEFA4P12838 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
DEFA4P12838 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.74□□□□□ -2.29
DEFA4P12838 RNU1-22P-201ENST00000363334 158 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 U3.4-201ENST00000363352 213 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 SNORA32.2-201ENST00000384049 122 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 RPS29P13-201ENST00000402041 169 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 MTCYBP36-201ENST00000404146 440 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 RPL23AP95-201ENST00000426806 265 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.74□□□□□ -2.29
DEFA4P12838 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.74□□□□□ -2.29
DEFA4P12838 HMGN2P9-201ENST00000476875 229 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 AC010587.1-201ENST00000505809 469 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 AC034244.1-201ENST00000507687 207 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 ATP5EP1-201ENST00000510257 156 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 AC109479.2-201ENST00000517842 174 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.74□□□□□ -2.29
DEFA4P12838 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.74□□□□□ -2.29
DEFA4P12838 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.74□□□□□ -2.29
DEFA4P12838 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.74□□□□□ -2.29
DEFA4P12838 AC090888.2-201ENST00000559765 1144 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 AC018714.1-201ENST00000605028 208 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 AL158032.1-201ENST00000605401 106 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 AC005520.5-201ENST00000613926 164 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 AC138649.3-201ENST00000622154 254 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 AC095038.3-201ENST00000634439 195 ntBASIC0.74□□□□□ -2.29
DEFA4P12838 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.74□□□□□ -2.29
DEFA4P12838 RNU6-1187P-201ENST00000364771 110 ntBASIC0.73□□□□□ -2.29
DEFA4P12838 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.73□□□□□ -2.29
DEFA4P12838 RNU6-1065P-201ENST00000384513 106 ntBASIC0.73□□□□□ -2.29
DEFA4P12838 MIR122-201ENST00000385044 85 ntBASIC0.73□□□□□ -2.29
DEFA4P12838 AL117342.1-201ENST00000404861 406 ntBASIC0.73□□□□□ -2.29
DEFA4P12838 MTCO3P41-201ENST00000414801 328 ntBASIC0.73□□□□□ -2.29
DEFA4P12838 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.73□□□□□ -2.29
DEFA4P12838 ARL5AP1-201ENST00000418991 388 ntBASIC0.73□□□□□ -2.29
DEFA4P12838 MRPL35P3-201ENST00000421557 364 ntBASIC0.73□□□□□ -2.29
DEFA4P12838 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.73□□□□□ -2.29
DEFA4P12838 AL133396.1-201ENST00000432048 687 ntBASIC0.73□□□□□ -2.29
DEFA4P12838 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.73□□□□□ -2.29
DEFA4P12838 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.73□□□□□ -2.29
DEFA4P12838 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.73□□□□□ -2.29
DEFA4P12838 ART2BP-201ENST00000453501 499 ntBASIC0.73□□□□□ -2.29
DEFA4P12838 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.73□□□□□ -2.29
DEFA4P12838 AC116347.2-201ENST00000514912 523 ntBASIC0.73□□□□□ -2.29
DEFA4P12838 AC112206.4-201ENST00000515142 405 ntBASIC0.73□□□□□ -2.29
DEFA4P12838 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.73□□□□□ -2.29
DEFA4P12838 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.73□□□□□ -2.29
DEFA4P12838 CBX3P8-201ENST00000532412 525 ntBASIC0.73□□□□□ -2.29
DEFA4P12838 AP002453.2-201ENST00000533503 320 ntBASIC0.73□□□□□ -2.29
DEFA4P12838 AC019288.1-201ENST00000557918 224 ntBASIC0.73□□□□□ -2.29
DEFA4P12838 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.73□□□□□ -2.29
DEFA4P12838 AC080078.3-201ENST00000605407 463 ntBASIC0.73□□□□□ -2.29
DEFA4P12838 AL359821.1-201ENST00000605519 182 ntBASIC0.73□□□□□ -2.29
DEFA4P12838 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.73□□□□□ -2.29
DEFA4P12838 AC100821.1-201ENST00000523153 2479 ntBASIC0.73□□□□□ -2.29
DEFA4P12838 MTND5P17-201ENST00000418405 1603 ntBASIC0.72□□□□□ -2.29
DEFA4P12838 RNU1-76P-201ENST00000362903 159 ntBASIC0.72□□□□□ -2.29
DEFA4P12838 SNORD113-6-201ENST00000363345 75 ntBASIC0.72□□□□□ -2.29
DEFA4P12838 RNU6-527P-201ENST00000363425 104 ntBASIC0.72□□□□□ -2.29
DEFA4P12838 SNORD32A-201ENST00000364805 84 ntBASIC0.72□□□□□ -2.29
DEFA4P12838 SNORA25.8-201ENST00000364831 128 ntBASIC0.72□□□□□ -2.29
DEFA4P12838 RNU6-43P-201ENST00000384302 107 ntBASIC0.72□□□□□ -2.29
DEFA4P12838 RNU6-809P-201ENST00000384461 107 ntBASIC0.72□□□□□ -2.29
DEFA4P12838 MIR548B-201ENST00000385247 97 ntBASIC0.72□□□□□ -2.29
DEFA4P12838 SNORA12.2-201ENST00000391040 156 ntBASIC0.72□□□□□ -2.29
DEFA4P12838 SNORA12-201ENST00000391162 147 ntBASIC0.72□□□□□ -2.29
DEFA4P12838 RNU6-1245P-201ENST00000411130 106 ntBASIC0.72□□□□□ -2.29
DEFA4P12838 RPL23AP36-201ENST00000413895 458 ntBASIC0.72□□□□□ -2.29
DEFA4P12838 AL135790.2-201ENST00000437701 267 ntBASIC0.72□□□□□ -2.29
DEFA4P12838 RPS27P1-201ENST00000450552 247 ntBASIC0.72□□□□□ -2.29
DEFA4P12838 AC007395.1-201ENST00000451333 677 ntBASIC0.72□□□□□ -2.29
DEFA4P12838 ATP5J2P3-201ENST00000451550 258 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms