Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 PCGEM1.1-201ENST00000613431 131 ntBASIC-1.08□□□□□ -2.58
TOP2AP11388 SNORD3E-202ENST00000627253 216 ntBASIC-1.08□□□□□ -2.58
TOP2AP11388 RNU6-23P-201ENST00000363283 107 ntBASIC-1.09□□□□□ -2.58
TOP2AP11388 RNU6-884P-201ENST00000363889 107 ntBASIC-1.09□□□□□ -2.58
TOP2AP11388 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC-1.09□□□□□ -2.58
TOP2AP11388 MTCO3P10-201ENST00000455912 772 ntBASIC-1.09□□□□□ -2.58
TOP2AP11388 RNU6-1095P-201ENST00000516148 108 ntBASIC-1.09□□□□□ -2.58
TOP2AP11388 AF235103.2-201ENST00000525753 346 ntBASIC-1.09□□□□□ -2.58
TOP2AP11388 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC-1.09□□□□□ -2.58
TOP2AP11388 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-1.09□□□□□ -2.58
TOP2AP11388 AC126365.2-201ENST00000580630 379 ntBASIC-1.09□□□□□ -2.58
TOP2AP11388 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.09□□□□□ -2.58
TOP2AP11388 NDUFA8P1-201ENST00000605525 367 ntBASIC-1.09□□□□□ -2.58
TOP2AP11388 AC055876.5-201ENST00000605667 259 ntBASIC-1.09□□□□□ -2.58
TOP2AP11388 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-1.09□□□□□ -2.58
TOP2AP11388 AC008759.3-201ENST00000613300 508 ntBASIC-1.09□□□□□ -2.58
TOP2AP11388 AC006213.4-201ENST00000616184 634 ntBASIC-1.09□□□□□ -2.58
TOP2AP11388 AC136475.10-201ENST00000620253 385 ntBASIC-1.09□□□□□ -2.58
TOP2AP11388 AC017037.3-201ENST00000625016 472 ntBASIC-1.09□□□□□ -2.58
TOP2AP11388 MIR198-201ENST00000637333 62 ntBASIC-1.09□□□□□ -2.58
TOP2AP11388 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-1.1□□□□□ -2.58
TOP2AP11388 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-1.1□□□□□ -2.58
TOP2AP11388 MTATP6P31-201ENST00000406985 692 ntBASIC-1.1□□□□□ -2.58
TOP2AP11388 UBE2V1P15-201ENST00000407776 448 ntBASIC-1.1□□□□□ -2.58
TOP2AP11388 AC127391.1-201ENST00000411737 98 ntBASIC-1.1□□□□□ -2.58
TOP2AP11388 AC098831.1-201ENST00000440661 216 ntBASIC-1.1□□□□□ -2.58
TOP2AP11388 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC-1.1□□□□□ -2.58
TOP2AP11388 ZNF886P-201ENST00000450781 723 ntBASIC-1.1□□□□□ -2.58
TOP2AP11388 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-1.1□□□□□ -2.58
TOP2AP11388 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC-1.1□□□□□ -2.58
TOP2AP11388 AC023194.1-201ENST00000493084 308 ntBASIC-1.1□□□□□ -2.58
TOP2AP11388 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-1.1□□□□□ -2.58
TOP2AP11388 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-1.1□□□□□ -2.58
TOP2AP11388 HMGB1P33-201ENST00000563485 527 ntBASIC-1.1□□□□□ -2.58
TOP2AP11388 RNA5SP259-201ENST00000365541 109 ntBASIC-1.1□□□□□ -2.59
TOP2AP11388 RNU6-657P-201ENST00000383904 107 ntBASIC-1.1□□□□□ -2.59
TOP2AP11388 RNU4-46P-201ENST00000410818 138 ntBASIC-1.1□□□□□ -2.59
TOP2AP11388 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-1.1□□□□□ -2.59
TOP2AP11388 AL008629.1-201ENST00000438615 184 ntBASIC-1.1□□□□□ -2.59
TOP2AP11388 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-1.1□□□□□ -2.59
TOP2AP11388 MTND1P3-201ENST00000484956 952 ntBASIC-1.1□□□□□ -2.59
TOP2AP11388 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-1.1□□□□□ -2.59
TOP2AP11388 PRELID3BP2-201ENST00000605362 201 ntBASIC-1.1□□□□□ -2.59
TOP2AP11388 Y_RNA.25-201ENST00000362528 102 ntBASIC-1.11□□□□□ -2.59
TOP2AP11388 RNA5SP493-201ENST00000364115 91 ntBASIC-1.11□□□□□ -2.59
TOP2AP11388 MIR548H2-201ENST00000408874 88 ntBASIC-1.11□□□□□ -2.59
TOP2AP11388 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-1.11□□□□□ -2.59
TOP2AP11388 RPL23AP50-201ENST00000434149 455 ntBASIC-1.11□□□□□ -2.59
TOP2AP11388 AC104332.1-201ENST00000440471 797 ntBASIC-1.11□□□□□ -2.59
TOP2AP11388 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
TOP2AP11388 RNA5SP268-201ENST00000516828 124 ntBASIC-1.11□□□□□ -2.59
TOP2AP11388 AC025423.2-201ENST00000537570 439 ntBASIC-1.11□□□□□ -2.59
TOP2AP11388 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-1.11□□□□□ -2.59
TOP2AP11388 PART1_2.1-201ENST00000612397 250 ntBASIC-1.11□□□□□ -2.59
TOP2AP11388 TUG1_2.1-201ENST00000614234 87 ntBASIC-1.11□□□□□ -2.59
TOP2AP11388 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-1.12□□□□□ -2.59
TOP2AP11388 RNA5SP517-201ENST00000364724 117 ntBASIC-1.12□□□□□ -2.59
TOP2AP11388 RNU6-152P-201ENST00000384037 107 ntBASIC-1.12□□□□□ -2.59
TOP2AP11388 MIR135A2-201ENST00000384854 100 ntBASIC-1.12□□□□□ -2.59
TOP2AP11388 AC011233.1-201ENST00000422812 283 ntBASIC-1.12□□□□□ -2.59
TOP2AP11388 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-1.12□□□□□ -2.59
TOP2AP11388 MTND2P4-201ENST00000445034 1004 ntBASIC-1.12□□□□□ -2.59
TOP2AP11388 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC-1.12□□□□□ -2.59
TOP2AP11388 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-1.12□□□□□ -2.59
TOP2AP11388 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-1.12□□□□□ -2.59
TOP2AP11388 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.12□□□□□ -2.59
TOP2AP11388 FTX_3.1-201ENST00000610451 147 ntBASIC-1.12□□□□□ -2.59
TOP2AP11388 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-1.12□□□□□ -2.59
TOP2AP11388 AL136310.1-201ENST00000404926 654 ntBASIC-1.13□□□□□ -2.59
TOP2AP11388 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.13□□□□□ -2.59
TOP2AP11388 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.13□□□□□ -2.59
TOP2AP11388 ZNF519P3-201ENST00000557158 1032 ntBASIC-1.13□□□□□ -2.59
TOP2AP11388 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC-1.13□□□□□ -2.59
TOP2AP11388 AC025588.3-201ENST00000604182 274 ntBASIC-1.13□□□□□ -2.59
TOP2AP11388 AC090116.1-201ENST00000615679 446 ntBASIC-1.13□□□□□ -2.59
TOP2AP11388 AC024940.5-201ENST00000622889 474 ntBASIC-1.13□□□□□ -2.59
TOP2AP11388 AC119674.1-220ENST00000641502 1048 ntBASIC-1.13□□□□□ -2.59
TOP2AP11388 MIR587-201ENST00000384845 96 ntBASIC-1.14□□□□□ -2.59
TOP2AP11388 MIR520A-201ENST00000384862 85 ntBASIC-1.14□□□□□ -2.59
TOP2AP11388 MIR601-201ENST00000385256 79 ntBASIC-1.14□□□□□ -2.59
TOP2AP11388 RNU6-269P-201ENST00000391077 97 ntBASIC-1.14□□□□□ -2.59
TOP2AP11388 SNORA75.2-201ENST00000391138 150 ntBASIC-1.14□□□□□ -2.59
TOP2AP11388 ISCA1P1-201ENST00000426679 387 ntBASIC-1.14□□□□□ -2.59
TOP2AP11388 AC024082.2-201ENST00000434771 238 ntBASIC-1.14□□□□□ -2.59
TOP2AP11388 RAC1P7-201ENST00000445367 377 ntBASIC-1.14□□□□□ -2.59
TOP2AP11388 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-1.14□□□□□ -2.59
TOP2AP11388 U8.21-201ENST00000459536 136 ntBASIC-1.14□□□□□ -2.59
TOP2AP11388 RPL39P38-201ENST00000467018 153 ntBASIC-1.14□□□□□ -2.59
TOP2AP11388 AP002453.2-201ENST00000533503 320 ntBASIC-1.14□□□□□ -2.59
TOP2AP11388 AL356057.1-201ENST00000533798 831 ntBASIC-1.14□□□□□ -2.59
TOP2AP11388 MIR3169-201ENST00000578032 83 ntBASIC-1.14□□□□□ -2.59
TOP2AP11388 RNU6-331P-201ENST00000384724 107 ntBASIC-1.15□□□□□ -2.59
TOP2AP11388 RNU6-244P-201ENST00000391028 104 ntBASIC-1.15□□□□□ -2.59
TOP2AP11388 MTND2P21-201ENST00000436242 1042 ntBASIC-1.15□□□□□ -2.59
TOP2AP11388 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-1.15□□□□□ -2.59
TOP2AP11388 RNU5A-7P-201ENST00000515979 116 ntBASIC-1.15□□□□□ -2.59
TOP2AP11388 AP000763.2-201ENST00000540641 163 ntBASIC-1.15□□□□□ -2.59
TOP2AP11388 AK6P2-201ENST00000549020 471 ntBASIC-1.15□□□□□ -2.59
TOP2AP11388 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.15□□□□□ -2.59
TOP2AP11388 RNU6-127P-201ENST00000390897 107 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms