Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.28□□□□□ -2.2
CD28P10747 AC010486.2-201ENST00000505572 483 ntBASIC1.28□□□□□ -2.2
CD28P10747 AC079140.5-201ENST00000507882 310 ntBASIC1.28□□□□□ -2.2
CD28P10747 MTCO3P7-201ENST00000510008 774 ntBASIC1.28□□□□□ -2.2
CD28P10747 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.28□□□□□ -2.2
CD28P10747 RNU6-445P-201ENST00000516949 107 ntBASIC1.28□□□□□ -2.2
CD28P10747 AC087441.2-201ENST00000529141 262 ntBASIC1.28□□□□□ -2.2
CD28P10747 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.28□□□□□ -2.2
CD28P10747 SNORD53B-201ENST00000577887 78 ntBASIC1.28□□□□□ -2.2
CD28P10747 MIR4255-201ENST00000579351 72 ntBASIC1.28□□□□□ -2.2
CD28P10747 MIR4781-201ENST00000585250 76 ntBASIC1.28□□□□□ -2.2
CD28P10747 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.28□□□□□ -2.2
CD28P10747 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.28□□□□□ -2.2
CD28P10747 SEPT7P9-203ENST00000604116 343 ntBASIC1.28□□□□□ -2.2
CD28P10747 AC123912.5-201ENST00000605470 343 ntBASIC1.28□□□□□ -2.2
CD28P10747 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.28□□□□□ -2.2
CD28P10747 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
CD28P10747 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
CD28P10747 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-37P-201ENST00000362692 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-527P-201ENST00000363425 104 ntBASIC1.27□□□□□ -2.21
CD28P10747 Y_RNA.169-201ENST00000363745 96 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-11P-201ENST00000364234 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-1141P-201ENST00000364520 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-336P-201ENST00000364891 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-25P-201ENST00000383873 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-1-201ENST00000383898 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-142P-201ENST00000384019 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-48P-201ENST00000384161 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-36P-201ENST00000384172 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-4P-201ENST00000384205 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-5P-201ENST00000384238 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-3P-201ENST00000384314 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-434P-201ENST00000384376 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-16P-201ENST00000384385 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-393P-201ENST00000384475 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-15P-201ENST00000384534 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-2-201ENST00000384627 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-29P-201ENST00000384637 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-9-201ENST00000384776 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-33P-201ENST00000384793 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNA5SP247-201ENST00000411181 105 ntBASIC1.27□□□□□ -2.21
CD28P10747 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.27□□□□□ -2.21
CD28P10747 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.27□□□□□ -2.21
CD28P10747 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.27□□□□□ -2.21
CD28P10747 SNAP23P1-201ENST00000433229 246 ntBASIC1.27□□□□□ -2.21
CD28P10747 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.27□□□□□ -2.21
CD28P10747 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.27□□□□□ -2.21
CD28P10747 RPL23AP6-201ENST00000446637 472 ntBASIC1.27□□□□□ -2.21
CD28P10747 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.27□□□□□ -2.21
CD28P10747 AL356010.1-201ENST00000456364 102 ntBASIC1.27□□□□□ -2.21
CD28P10747 PPP1R2P5-201ENST00000457256 603 ntBASIC1.27□□□□□ -2.21
CD28P10747 AL163540.1-201ENST00000485382 386 ntBASIC1.27□□□□□ -2.21
CD28P10747 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.27□□□□□ -2.21
CD28P10747 AC093259.1-201ENST00000509755 300 ntBASIC1.27□□□□□ -2.21
CD28P10747 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.27□□□□□ -2.21
CD28P10747 RNU6-377P-201ENST00000515965 102 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-965P-201ENST00000516721 96 ntBASIC1.27□□□□□ -2.21
CD28P10747 MTCO2P4-201ENST00000517968 247 ntBASIC1.27□□□□□ -2.21
CD28P10747 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.27□□□□□ -2.21
CD28P10747 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.27□□□□□ -2.21
CD28P10747 DUXAP5-201ENST00000529668 529 ntBASIC1.27□□□□□ -2.21
CD28P10747 AP002963.1-201ENST00000530590 184 ntBASIC1.27□□□□□ -2.21
CD28P10747 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
CD28P10747 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.27□□□□□ -2.21
CD28P10747 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.27□□□□□ -2.21
CD28P10747 MIR3941-201ENST00000582572 103 ntBASIC1.27□□□□□ -2.21
CD28P10747 MIR4713-201ENST00000582691 75 ntBASIC1.27□□□□□ -2.21
CD28P10747 MIR3136-201ENST00000583498 78 ntBASIC1.27□□□□□ -2.21
CD28P10747 AL034555.1-201ENST00000604816 211 ntBASIC1.27□□□□□ -2.21
CD28P10747 AL356157.2-201ENST00000605122 111 ntBASIC1.27□□□□□ -2.21
CD28P10747 RNU6-6P-201ENST00000606623 107 ntBASIC1.27□□□□□ -2.21
CD28P10747 AC103810.8-201ENST00000607347 118 ntBASIC1.27□□□□□ -2.21
CD28P10747 AC104073.3-201ENST00000610942 955 ntBASIC1.27□□□□□ -2.21
CD28P10747 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CD28P10747 AC097372.5-201ENST00000623665 376 ntBASIC1.27□□□□□ -2.21
CD28P10747 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.27□□□□□ -2.21
CD28P10747 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CD28P10747 RNU1-42P-201ENST00000364033 160 ntBASIC1.26□□□□□ -2.21
CD28P10747 SNORD32A-201ENST00000364805 84 ntBASIC1.26□□□□□ -2.21
CD28P10747 MTCYBP2-201ENST00000407745 171 ntBASIC1.26□□□□□ -2.21
CD28P10747 RNU2-29P-201ENST00000410423 189 ntBASIC1.26□□□□□ -2.21
CD28P10747 RN7SKP61-201ENST00000410642 295 ntBASIC1.26□□□□□ -2.21
CD28P10747 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.26□□□□□ -2.21
CD28P10747 BX295541.1-201ENST00000417774 250 ntBASIC1.26□□□□□ -2.21
CD28P10747 AL513185.2-201ENST00000425543 193 ntBASIC1.26□□□□□ -2.21
CD28P10747 RPL23AP95-201ENST00000426806 265 ntBASIC1.26□□□□□ -2.21
CD28P10747 Z82205.1-201ENST00000428456 297 ntBASIC1.26□□□□□ -2.21
CD28P10747 MTCO2P11-201ENST00000431069 680 ntBASIC1.26□□□□□ -2.21
CD28P10747 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.26□□□□□ -2.21
CD28P10747 KATNBL1P3-201ENST00000443475 909 ntBASIC1.26□□□□□ -2.21
CD28P10747 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.26□□□□□ -2.21
CD28P10747 C1DP4-201ENST00000455429 424 ntBASIC1.26□□□□□ -2.21
CD28P10747 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.26□□□□□ -2.21
CD28P10747 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.26□□□□□ -2.21
CD28P10747 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.26□□□□□ -2.21
CD28P10747 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.26□□□□□ -2.21
CD28P10747 AC105417.1-201ENST00000514691 285 ntBASIC1.26□□□□□ -2.21
CD28P10747 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.26□□□□□ -2.21
CD28P10747 CBX3P4-201ENST00000538909 354 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms