Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL162725.1-201ENST00000435405 301 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 RPS15AP7-201ENST00000439294 405 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 RPL26P26-201ENST00000480251 434 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 RPL30P14-201ENST00000482744 348 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 AC025554.1-201ENST00000505641 188 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 PPBPP1-201ENST00000510807 373 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 VWA8P1-201ENST00000510889 176 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 SNORA27.4-201ENST00000516650 95 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 AC008011.1-201ENST00000545989 227 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 AK6P2-201ENST00000549020 471 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 IGHVIII-44-202ENST00000636235 289 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 RNU1-33P-201ENST00000364249 162 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 Y_RNA.343-201ENST00000365354 112 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 RNU6-514P-201ENST00000384208 107 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 RNU6-843P-201ENST00000384454 104 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 MIR186-201ENST00000384988 86 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 SNORD12B-201ENST00000410433 91 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 RNU5A-5P-201ENST00000411054 116 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 BPY2DP-201ENST00000422208 265 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 RPL23AP82-202ENST00000427528 469 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 AC243964.1-201ENST00000441814 261 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 UQCRBP2-201ENST00000447827 297 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 AC025518.1-201ENST00000479856 347 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 RPL23AP75-201ENST00000491601 451 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 AC073349.3-201ENST00000617616 186 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 MTND1P7-201ENST00000632801 297 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 AP000553.6-201ENST00000641242 118 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 ADAM3A-203ENST00000461344 2157 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 AC233981.2-201ENST00000611524 1614 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 ZNF962P-201ENST00000443465 3140 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 AL079305.1-201ENST00000623159 3008 ntBASIC4.89□□□□□ -1.63
CSB-PGBD3P0DP91 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 LINC02471-203ENST00000641941 4752 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 MIR410-201ENST00000362222 80 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 Y_RNA.586-201ENST00000391146 98 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 FTH1P15-201ENST00000406984 280 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 Y_RNA.629-201ENST00000411368 105 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 OOSP1P1-201ENST00000423265 274 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 AC011742.1-201ENST00000431448 434 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 AC009237.7-201ENST00000447357 229 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 HMGN2P10-201ENST00000448085 265 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 MRPS10P1-201ENST00000448483 130 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 RPL23AP3-201ENST00000453844 468 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 snoU13.28-201ENST00000459235 104 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 RN7SL807P-201ENST00000470923 297 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 RPL30P1-201ENST00000488676 339 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 CR383656.8-201ENST00000549046 145 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 AC008749.1-201ENST00000597650 306 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 MIR7851-201ENST00000610611 160 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 AC024581.2-201ENST00000619986 252 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 SCARNA4-201ENST00000629045 128 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 AC011266.1-201ENST00000624119 3569 ntBASIC4.88□□□□□ -1.63
CSB-PGBD3P0DP91 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 SNORD56.1-201ENST00000362913 68 ntBASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 SNORA38.1-201ENST00000364172 131 ntBASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 AC005326.1-201ENST00000429197 123 ntBASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 SSXP4-201ENST00000451349 245 ntBASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 AP000870.1-201ENST00000472927 406 ntBASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 RPL31P61-201ENST00000496160 376 ntBASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms