Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 Y_RNA.594-201ENST00000410373 140 ntBASIC2.42□□□□□ -2.02
CD48P09326 AL354751.2-201ENST00000415471 210 ntBASIC2.42□□□□□ -2.02
CD48P09326 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.42□□□□□ -2.02
CD48P09326 OOSP1P1-201ENST00000423265 274 ntBASIC2.42□□□□□ -2.02
CD48P09326 USP9YP30-201ENST00000430729 455 ntBASIC2.42□□□□□ -2.02
CD48P09326 AC018634.1-201ENST00000437554 401 ntBASIC2.42□□□□□ -2.02
CD48P09326 DAP3P1-201ENST00000441522 278 ntBASIC2.42□□□□□ -2.02
CD48P09326 AC007677.1-201ENST00000445757 515 ntBASIC2.42□□□□□ -2.02
CD48P09326 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.42□□□□□ -2.02
CD48P09326 Y_RNA.639-201ENST00000458981 102 ntBASIC2.42□□□□□ -2.02
CD48P09326 Y_RNA.653-201ENST00000459091 95 ntBASIC2.42□□□□□ -2.02
CD48P09326 AC097473.1-201ENST00000508142 408 ntBASIC2.42□□□□□ -2.02
CD48P09326 PTP4A1P4-201ENST00000512479 322 ntBASIC2.42□□□□□ -2.02
CD48P09326 RNU6-1170P-201ENST00000515974 106 ntBASIC2.42□□□□□ -2.02
CD48P09326 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.42□□□□□ -2.02
CD48P09326 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.42□□□□□ -2.02
CD48P09326 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.42□□□□□ -2.02
CD48P09326 AC093249.1-201ENST00000567049 203 ntBASIC2.42□□□□□ -2.02
CD48P09326 MIR3162-201ENST00000581818 82 ntBASIC2.42□□□□□ -2.02
CD48P09326 MIR3945-201ENST00000581853 98 ntBASIC2.42□□□□□ -2.02
CD48P09326 HMGN2P15-201ENST00000585707 270 ntBASIC2.42□□□□□ -2.02
CD48P09326 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.42□□□□□ -2.02
CD48P09326 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.42□□□□□ -2.02
CD48P09326 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CD48P09326 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CD48P09326 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CD48P09326 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.41□□□□□ -2.02
CD48P09326 RNA5SP289-201ENST00000362332 137 ntBASIC2.41□□□□□ -2.02
CD48P09326 RNA5SP393-201ENST00000363423 117 ntBASIC2.41□□□□□ -2.02
CD48P09326 Y_RNA.394-201ENST00000383942 103 ntBASIC2.41□□□□□ -2.02
CD48P09326 Y_RNA.395-201ENST00000383945 109 ntBASIC2.41□□□□□ -2.02
CD48P09326 MIR517A-201ENST00000385001 87 ntBASIC2.41□□□□□ -2.02
CD48P09326 Y_RNA.579-201ENST00000390939 94 ntBASIC2.41□□□□□ -2.02
CD48P09326 RNA5SP252-201ENST00000391131 119 ntBASIC2.41□□□□□ -2.02
CD48P09326 MIR1302-11-201ENST00000408051 138 ntBASIC2.41□□□□□ -2.02
CD48P09326 MIR1302-9-201ENST00000408365 138 ntBASIC2.41□□□□□ -2.02
CD48P09326 MIR1302-10-201ENST00000408734 138 ntBASIC2.41□□□□□ -2.02
CD48P09326 RNU6-174P-201ENST00000410406 106 ntBASIC2.41□□□□□ -2.02
CD48P09326 RNU6-325P-201ENST00000411132 105 ntBASIC2.41□□□□□ -2.02
CD48P09326 AC005534.2-201ENST00000431047 433 ntBASIC2.41□□□□□ -2.02
CD48P09326 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.41□□□□□ -2.02
CD48P09326 AL031274.1-201ENST00000450334 232 ntBASIC2.41□□□□□ -2.02
CD48P09326 RPL9P9-202ENST00000466501 579 ntBASIC2.41□□□□□ -2.02
CD48P09326 RN7SL636P-201ENST00000497504 294 ntBASIC2.41□□□□□ -2.02
CD48P09326 AC116655.1-201ENST00000508324 901 ntBASIC2.41□□□□□ -2.02
CD48P09326 Y_RNA.670-201ENST00000516255 105 ntBASIC2.41□□□□□ -2.02
CD48P09326 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.41□□□□□ -2.02
CD48P09326 AC006199.1-201ENST00000548728 219 ntBASIC2.41□□□□□ -2.02
CD48P09326 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.41□□□□□ -2.02
CD48P09326 AL442663.2-201ENST00000554385 511 ntBASIC2.41□□□□□ -2.02
CD48P09326 AC103996.1-201ENST00000555468 102 ntBASIC2.41□□□□□ -2.02
CD48P09326 AC011494.1-201ENST00000596454 237 ntBASIC2.41□□□□□ -2.02
CD48P09326 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CD48P09326 MIR1302-2-201ENST00000607096 138 ntBASIC2.41□□□□□ -2.02
CD48P09326 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.41□□□□□ -2.02
CD48P09326 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.41□□□□□ -2.02
CD48P09326 AL669831.3-213ENST00000636676 183 ntBASIC2.41□□□□□ -2.02
CD48P09326 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.41□□□□□ -2.02
CD48P09326 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
CD48P09326 MTND5P10-201ENST00000603719 1809 ntBASIC2.4□□□□□ -2.02
CD48P09326 Y_RNA.146-201ENST00000363549 102 ntBASIC2.4□□□□□ -2.03
CD48P09326 SNORA14A-201ENST00000364773 135 ntBASIC2.4□□□□□ -2.03
CD48P09326 Y_RNA.404-201ENST00000383978 102 ntBASIC2.4□□□□□ -2.03
CD48P09326 RNU6-310P-201ENST00000384655 107 ntBASIC2.4□□□□□ -2.03
CD48P09326 Y_RNA.646-201ENST00000410980 101 ntBASIC2.4□□□□□ -2.03
CD48P09326 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.4□□□□□ -2.03
CD48P09326 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.4□□□□□ -2.03
CD48P09326 SUMO1P4-201ENST00000429430 302 ntBASIC2.4□□□□□ -2.03
CD48P09326 AL133396.1-201ENST00000432048 687 ntBASIC2.4□□□□□ -2.03
CD48P09326 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.4□□□□□ -2.03
CD48P09326 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.4□□□□□ -2.03
CD48P09326 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.4□□□□□ -2.03
CD48P09326 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.4□□□□□ -2.03
CD48P09326 AC027575.1-201ENST00000481064 460 ntBASIC2.4□□□□□ -2.03
CD48P09326 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.4□□□□□ -2.03
CD48P09326 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.4□□□□□ -2.03
CD48P09326 RNA5SP82-201ENST00000516707 92 ntBASIC2.4□□□□□ -2.03
CD48P09326 SNORD19.2-201ENST00000516978 73 ntBASIC2.4□□□□□ -2.03
CD48P09326 ANP32BP3-201ENST00000559213 706 ntBASIC2.4□□□□□ -2.03
CD48P09326 BNIP3P16-201ENST00000589779 534 ntBASIC2.4□□□□□ -2.03
CD48P09326 AC018889.1-201ENST00000605372 397 ntBASIC2.4□□□□□ -2.03
CD48P09326 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.4□□□□□ -2.03
CD48P09326 AC009229.3-201ENST00000608056 282 ntBASIC2.4□□□□□ -2.03
CD48P09326 AC004852.3-201ENST00000614131 326 ntBASIC2.4□□□□□ -2.03
CD48P09326 AC134503.1-201ENST00000633048 54 ntBASIC2.4□□□□□ -2.03
CD48P09326 MIR3199-2-201ENST00000636243 86 ntBASIC2.4□□□□□ -2.03
CD48P09326 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CD48P09326 AC005336.3-201ENST00000623833 2679 ntBASIC2.4□□□□□ -2.03
CD48P09326 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CD48P09326 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CD48P09326 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.4□□□□□ -2.03
CD48P09326 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.4□□□□□ -2.03
CD48P09326 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CD48P09326 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CD48P09326 HAUS6P2-201ENST00000433254 2404 ntBASIC2.39□□□□□ -2.03
CD48P09326 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CD48P09326 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.39□□□□□ -2.03
CD48P09326 RNU6-428P-201ENST00000362942 107 ntBASIC2.39□□□□□ -2.03
CD48P09326 RNU6-105P-201ENST00000363909 104 ntBASIC2.39□□□□□ -2.03
CD48P09326 SNORD114-30-201ENST00000364448 72 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms