Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A2P08572 Vault.3-201ENST00000516676 95 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 RN7SKP256-201ENST00000517201 314 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.02□□□□□ -2.25
COL4A2P08572 OR5AL2P-201ENST00000532185 920 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A2P08572 AC137800.2-201ENST00000574375 120 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 MIR3682-201ENST00000581338 84 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 AC090616.2-202ENST00000584248 222 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 MIR548AC-201ENST00000585049 88 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 CLIC4P2-201ENST00000601934 717 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 AC022022.2-201ENST00000602989 360 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.02□□□□□ -2.25
COL4A2P08572 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.02□□□□□ -2.25
COL4A2P08572 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
COL4A2P08572 uc_338.11-201ENST00000619132 160 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 U1.36-201ENST00000620684 176 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.02□□□□□ -2.25
COL4A2P08572 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.02□□□□□ -2.25
COL4A2P08572 AC080100.1-201ENST00000624239 5356 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
COL4A2P08572 RNU6-655P-201ENST00000362858 107 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 SNORD56.1-201ENST00000362913 68 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 RNU6-384P-201ENST00000364900 104 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 RNU5E-7P-201ENST00000365290 117 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 RNU6-611P-201ENST00000384276 104 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 Y_RNA.576-201ENST00000384781 102 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 MIR578-201ENST00000384828 96 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 MIR186-201ENST00000384988 86 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 MIR29B2-201ENST00000385055 81 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 RNU6-293P-201ENST00000411259 106 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.01□□□□□ -2.25
COL4A2P08572 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.01□□□□□ -2.25
COL4A2P08572 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.01□□□□□ -2.25
COL4A2P08572 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.01□□□□□ -2.25
COL4A2P08572 UBE2D3P4-201ENST00000441973 436 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AL353752.1-201ENST00000454946 260 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 PRELID3BP1-201ENST00000457142 540 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.01□□□□□ -2.25
COL4A2P08572 PTP4A1P4-201ENST00000512479 322 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 RNU5F-2P-201ENST00000516066 82 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 CYCSP27-201ENST00000527643 293 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AC022880.1-201ENST00000534017 973 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.01□□□□□ -2.25
COL4A2P08572 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.01□□□□□ -2.25
COL4A2P08572 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.01□□□□□ -2.25
COL4A2P08572 AC012065.4-201ENST00000602445 679 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AC073410.2-201ENST00000603240 332 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AC092140.2-201ENST00000618027 521 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AC099842.1-201ENST00000619919 596 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 RMST_7.1-201ENST00000621935 268 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AC011155.2-201ENST00000623202 216 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AC090517.3-201ENST00000625170 141 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.01□□□□□ -2.25
COL4A2P08572 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
COL4A2P08572 U6.114-201ENST00000636407 96 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.01□□□□□ -2.25
COL4A2P08572 MTND5P17-201ENST00000418405 1603 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
COL4A2P08572 RNU1-58P-201ENST00000362413 163 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 RNU6-1287P-201ENST00000362914 107 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 SNORD115-3-201ENST00000363100 82 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 RNU6-944P-201ENST00000364023 107 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 SNORD14B-201ENST00000364533 90 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 SNORA72.3-201ENST00000365074 132 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 Y_RNA.324-201ENST00000365165 102 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 RNU6-1060P-201ENST00000384664 107 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 MIR676-201ENST00000390702 67 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 MIR1262-201ENST00000408276 93 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 RNU2-3P-201ENST00000410144 191 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.01□□□□□ -2.25
COL4A2P08572 MED13P1-201ENST00000428342 171 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AC005534.2-201ENST00000431047 433 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.01□□□□□ -2.25
COL4A2P08572 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.01□□□□□ -2.25
COL4A2P08572 HSPE1P24-201ENST00000450782 238 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AL133217.1-201ENST00000450980 425 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 snoU109.1-201ENST00000459339 135 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AC116562.3-201ENST00000506136 177 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 MTCYBP40-201ENST00000509390 1135 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AC009646.1-201ENST00000510455 318 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 RNU6-965P-201ENST00000516721 96 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AC090572.1-201ENST00000519251 160 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AC034114.1-201ENST00000520293 285 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AC068587.5-201ENST00000528506 175 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.01□□□□□ -2.25
COL4A2P08572 AC087883.1-201ENST00000551882 391 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.01□□□□□ -2.25
COL4A2P08572 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.01□□□□□ -2.25
COL4A2P08572 Z99289.3-201ENST00000605586 594 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AC004908.3-201ENST00000610248 625 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.01□□□□□ -2.25
COL4A2P08572 AL050303.3-201ENST00000613704 284 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.01□□□□□ -2.25
COL4A2P08572 AL442644.1-201ENST00000454390 3105 ntBASIC1□□□□□ -2.25
COL4A2P08572 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
COL4A2P08572 OR4G2P-201ENST00000328113 903 ntBASIC1□□□□□ -2.25
COL4A2P08572 RNU6-179P-201ENST00000363350 107 ntBASIC1□□□□□ -2.25
COL4A2P08572 RNY4P34-201ENST00000364779 95 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms