Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.13□□□□□ -1.91
RHOP08100 RNU6-635P-201ENST00000516651 102 ntBASIC3.13□□□□□ -1.91
RHOP08100 SCARNA20.6-201ENST00000517251 106 ntBASIC3.13□□□□□ -1.91
RHOP08100 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.13□□□□□ -1.91
RHOP08100 AC040926.1-201ENST00000530195 238 ntBASIC3.13□□□□□ -1.91
RHOP08100 AC104581.2-201ENST00000572227 430 ntBASIC3.13□□□□□ -1.91
RHOP08100 AC006600.1-201ENST00000572529 153 ntBASIC3.13□□□□□ -1.91
RHOP08100 AC060766.3-201ENST00000591442 263 ntBASIC3.13□□□□□ -1.91
RHOP08100 AC073476.4-201ENST00000628409 72 ntBASIC3.13□□□□□ -1.91
RHOP08100 AC110491.1-201ENST00000562191 2010 ntBASIC3.13□□□□□ -1.91
RHOP08100 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
RHOP08100 AC233263.6-201ENST00000631132 1963 ntBASIC3.12□□□□□ -1.91
RHOP08100 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
RHOP08100 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.12□□□□□ -1.91
RHOP08100 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RHOP08100 Y_RNA.123-201ENST00000363338 102 ntBASIC3.12□□□□□ -1.91
RHOP08100 Y_RNA.152-201ENST00000363578 100 ntBASIC3.12□□□□□ -1.91
RHOP08100 AP002088.1-201ENST00000382740 395 ntBASIC3.12□□□□□ -1.91
RHOP08100 Y_RNA.556-201ENST00000384677 113 ntBASIC3.12□□□□□ -1.91
RHOP08100 MT-TG-201ENST00000387429 68 ntBASIC3.12□□□□□ -1.91
RHOP08100 RNU6-1109P-201ENST00000391187 107 ntBASIC3.12□□□□□ -1.91
RHOP08100 BTF3L4P2-201ENST00000392798 346 ntBASIC3.12□□□□□ -1.91
RHOP08100 RNA5SP494-201ENST00000410653 129 ntBASIC3.12□□□□□ -1.91
RHOP08100 AL139281.1-201ENST00000422120 335 ntBASIC3.12□□□□□ -1.91
RHOP08100 BPY2DP-201ENST00000422208 265 ntBASIC3.12□□□□□ -1.91
RHOP08100 AC092423.1-201ENST00000430165 186 ntBASIC3.12□□□□□ -1.91
RHOP08100 AC105272.1-201ENST00000438604 198 ntBASIC3.12□□□□□ -1.91
RHOP08100 HMGN2P10-201ENST00000448085 265 ntBASIC3.12□□□□□ -1.91
RHOP08100 RPL22P13-201ENST00000493291 347 ntBASIC3.12□□□□□ -1.91
RHOP08100 RN7SKP132-201ENST00000516001 208 ntBASIC3.12□□□□□ -1.91
RHOP08100 CR383656.8-201ENST00000549046 145 ntBASIC3.12□□□□□ -1.91
RHOP08100 AC006006.1-201ENST00000603082 144 ntBASIC3.12□□□□□ -1.91
RHOP08100 HSPE1P7-201ENST00000604681 321 ntBASIC3.12□□□□□ -1.91
RHOP08100 AC099778.2-201ENST00000610904 211 ntBASIC3.12□□□□□ -1.91
RHOP08100 U2.1-201ENST00000618978 145 ntBASIC3.12□□□□□ -1.91
RHOP08100 AC243829.7-201ENST00000633081 225 ntBASIC3.12□□□□□ -1.91
RHOP08100 AC241585.2-209ENST00000638217 143 ntBASIC3.12□□□□□ -1.91
RHOP08100 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.12□□□□□ -1.91
RHOP08100 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RHOP08100 AC103988.1-201ENST00000566382 2177 ntBASIC3.12□□□□□ -1.91
RHOP08100 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RHOP08100 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RHOP08100 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.11□□□□□ -1.91
RHOP08100 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RHOP08100 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RHOP08100 RNY3P11-201ENST00000364153 102 ntBASIC3.11□□□□□ -1.91
RHOP08100 RNU6-702P-201ENST00000364982 107 ntBASIC3.11□□□□□ -1.91
RHOP08100 SNORA69.1-201ENST00000390904 137 ntBASIC3.11□□□□□ -1.91
RHOP08100 Y_RNA.592-201ENST00000410274 109 ntBASIC3.11□□□□□ -1.91
RHOP08100 MTCO3P19-201ENST00000415864 321 ntBASIC3.11□□□□□ -1.91
RHOP08100 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.11□□□□□ -1.91
RHOP08100 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.11□□□□□ -1.91
RHOP08100 AC125238.1-201ENST00000448842 249 ntBASIC3.11□□□□□ -1.91
RHOP08100 AL513124.1-201ENST00000450410 614 ntBASIC3.11□□□□□ -1.91
RHOP08100 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.11□□□□□ -1.91
RHOP08100 MTND4LP22-201ENST00000508209 276 ntBASIC3.11□□□□□ -1.91
RHOP08100 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.11□□□□□ -1.91
RHOP08100 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.11□□□□□ -1.91
RHOP08100 AC131281.1-201ENST00000522984 164 ntBASIC3.11□□□□□ -1.91
RHOP08100 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.11□□□□□ -1.91
RHOP08100 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.11□□□□□ -1.91
RHOP08100 MIR3162-201ENST00000581818 82 ntBASIC3.11□□□□□ -1.91
RHOP08100 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.11□□□□□ -1.91
RHOP08100 AL356157.2-201ENST00000605122 111 ntBASIC3.11□□□□□ -1.91
RHOP08100 AC007792.1-201ENST00000623023 402 ntBASIC3.11□□□□□ -1.91
RHOP08100 AC073308.1-201ENST00000623696 305 ntBASIC3.11□□□□□ -1.91
RHOP08100 SNORA50A-202ENST00000629536 136 ntBASIC3.11□□□□□ -1.91
RHOP08100 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.11□□□□□ -1.91
RHOP08100 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RHOP08100 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
RHOP08100 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.11□□□□□ -1.91
RHOP08100 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.11□□□□□ -1.91
RHOP08100 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RHOP08100 AC009487.2-201ENST00000420969 6821 ntBASIC3.1□□□□□ -1.91
RHOP08100 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.1□□□□□ -1.91
RHOP08100 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RHOP08100 MIR449A-201ENST00000362113 91 ntBASIC3.1□□□□□ -1.91
RHOP08100 RNU6-874P-201ENST00000362390 105 ntBASIC3.1□□□□□ -1.91
RHOP08100 RNU6-527P-201ENST00000363425 104 ntBASIC3.1□□□□□ -1.91
RHOP08100 RNU6-851P-201ENST00000384565 107 ntBASIC3.1□□□□□ -1.91
RHOP08100 Y_RNA.551-201ENST00000384661 102 ntBASIC3.1□□□□□ -1.91
RHOP08100 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RHOP08100 SNORA12.2-201ENST00000391040 156 ntBASIC3.1□□□□□ -1.91
RHOP08100 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RHOP08100 Y_RNA.618-201ENST00000410949 107 ntBASIC3.1□□□□□ -1.91
RHOP08100 AL591043.1-201ENST00000432461 424 ntBASIC3.1□□□□□ -1.91
RHOP08100 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RHOP08100 AC243964.1-201ENST00000441814 261 ntBASIC3.1□□□□□ -1.91
RHOP08100 RPS12P18-201ENST00000442381 270 ntBASIC3.1□□□□□ -1.91
RHOP08100 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.1□□□□□ -1.91
RHOP08100 AC109329.1-201ENST00000518744 317 ntBASIC3.1□□□□□ -1.91
RHOP08100 AC100812.1-201ENST00000607622 580 ntBASIC3.1□□□□□ -1.91
RHOP08100 SCARNA4-201ENST00000629045 128 ntBASIC3.1□□□□□ -1.91
RHOP08100 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
RHOP08100 AC010680.1-201ENST00000590024 3590 ntBASIC3.1□□□□□ -1.91
RHOP08100 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.1□□□□□ -1.91
RHOP08100 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.1□□□□□ -1.91
RHOP08100 HAUS6P2-201ENST00000433254 2404 ntBASIC3.1□□□□□ -1.91
RHOP08100 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.09□□□□□ -1.91
RHOP08100 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms