Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.7□□□□□ -1.82
APPP05067 AL445305.1-201ENST00000432577 575 ntBASIC3.7□□□□□ -1.82
APPP05067 AC244505.4-201ENST00000434905 287 ntBASIC3.7□□□□□ -1.82
APPP05067 AC004383.1-201ENST00000438135 289 ntBASIC3.7□□□□□ -1.82
APPP05067 SSXP5-201ENST00000443473 287 ntBASIC3.7□□□□□ -1.82
APPP05067 AC010655.3-201ENST00000478818 450 ntBASIC3.7□□□□□ -1.82
APPP05067 AF186996.7-201ENST00000492781 209 ntBASIC3.7□□□□□ -1.82
APPP05067 AC008885.1-201ENST00000514930 301 ntBASIC3.7□□□□□ -1.82
APPP05067 RNU1-143P-201ENST00000516296 146 ntBASIC3.7□□□□□ -1.82
APPP05067 SNORA74D-201ENST00000516404 141 ntBASIC3.7□□□□□ -1.82
APPP05067 RN7SKP272-201ENST00000516988 232 ntBASIC3.7□□□□□ -1.82
APPP05067 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.7□□□□□ -1.82
APPP05067 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.7□□□□□ -1.82
APPP05067 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.7□□□□□ -1.82
APPP05067 CR383656.8-201ENST00000549046 145 ntBASIC3.7□□□□□ -1.82
APPP05067 AC009163.5-201ENST00000575421 637 ntBASIC3.7□□□□□ -1.82
APPP05067 U1.23-201ENST00000610293 146 ntBASIC3.7□□□□□ -1.82
APPP05067 RNU1-68P-201ENST00000615382 146 ntBASIC3.7□□□□□ -1.82
APPP05067 U1.39-201ENST00000621562 146 ntBASIC3.7□□□□□ -1.82
APPP05067 MIR3199-2-201ENST00000636243 86 ntBASIC3.7□□□□□ -1.82
APPP05067 MIR622-201ENST00000638396 96 ntBASIC3.7□□□□□ -1.82
APPP05067 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APPP05067 AL353743.1-202ENST00000431724 1695 ntBASIC3.7□□□□□ -1.82
APPP05067 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.7□□□□□ -1.82
APPP05067 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.7□□□□□ -1.82
APPP05067 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
APPP05067 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.69□□□□□ -1.82
APPP05067 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
APPP05067 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
APPP05067 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.69□□□□□ -1.82
APPP05067 RNU6-222P-201ENST00000362438 107 ntBASIC3.69□□□□□ -1.82
APPP05067 Y_RNA.26-201ENST00000362539 101 ntBASIC3.69□□□□□ -1.82
APPP05067 Y_RNA.39-201ENST00000362620 98 ntBASIC3.69□□□□□ -1.82
APPP05067 RNU6-238P-201ENST00000363313 106 ntBASIC3.69□□□□□ -1.82
APPP05067 SNORD56.3-201ENST00000363507 71 ntBASIC3.69□□□□□ -1.82
APPP05067 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.69□□□□□ -1.82
APPP05067 SNORA48.2-201ENST00000390926 124 ntBASIC3.69□□□□□ -1.82
APPP05067 SNORA12.2-201ENST00000391040 156 ntBASIC3.69□□□□□ -1.82
APPP05067 BTF3L4P2-201ENST00000392798 346 ntBASIC3.69□□□□□ -1.82
APPP05067 RPL21P75-201ENST00000396599 483 ntBASIC3.69□□□□□ -1.82
APPP05067 RPL21P28-201ENST00000401418 483 ntBASIC3.69□□□□□ -1.82
APPP05067 AL358453.1-201ENST00000422522 250 ntBASIC3.69□□□□□ -1.82
APPP05067 RPL23AP22-201ENST00000437556 453 ntBASIC3.69□□□□□ -1.82
APPP05067 RPL21P39-201ENST00000463605 483 ntBASIC3.69□□□□□ -1.82
APPP05067 AC087190.1-201ENST00000484462 480 ntBASIC3.69□□□□□ -1.82
APPP05067 AC093591.1-201ENST00000491435 481 ntBASIC3.69□□□□□ -1.82
APPP05067 RPL21P16-201ENST00000495531 483 ntBASIC3.69□□□□□ -1.82
APPP05067 RNA5SP341-201ENST00000516261 117 ntBASIC3.69□□□□□ -1.82
APPP05067 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.69□□□□□ -1.82
APPP05067 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.69□□□□□ -1.82
APPP05067 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.69□□□□□ -1.82
APPP05067 AC091152.3-201ENST00000604227 325 ntBASIC3.69□□□□□ -1.82
APPP05067 AC019159.1-201ENST00000605094 187 ntBASIC3.69□□□□□ -1.82
APPP05067 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
APPP05067 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
APPP05067 AC009487.2-201ENST00000420969 6821 ntBASIC3.68□□□□□ -1.82
APPP05067 RNU6-505P-201ENST00000384427 107 ntBASIC3.68□□□□□ -1.82
APPP05067 MIR128-1-201ENST00000384921 82 ntBASIC3.68□□□□□ -1.82
APPP05067 BMS1P22-201ENST00000414726 313 ntBASIC3.68□□□□□ -1.82
APPP05067 DPH3P2-201ENST00000422618 250 ntBASIC3.68□□□□□ -1.82
APPP05067 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.68□□□□□ -1.82
APPP05067 RNU7-87P-201ENST00000459343 62 ntBASIC3.68□□□□□ -1.82
APPP05067 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.68□□□□□ -1.82
APPP05067 AL590705.4-201ENST00000532209 134 ntBASIC3.68□□□□□ -1.82
APPP05067 MIR4503-201ENST00000582187 83 ntBASIC3.68□□□□□ -1.82
APPP05067 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.68□□□□□ -1.82
APPP05067 AC124312.5-201ENST00000604451 268 ntBASIC3.68□□□□□ -1.82
APPP05067 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.68□□□□□ -1.82
APPP05067 GABRG2-229ENST00000641017 3628 ntBASIC3.68□□□□□ -1.82
APPP05067 MAPK10-266ENST00000641066 6555 ntBASIC3.67□□□□□ -1.82
APPP05067 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.67□□□□□ -1.82
APPP05067 MIR22-201ENST00000362190 85 ntBASIC3.67□□□□□ -1.82
APPP05067 U3.13-201ENST00000364804 214 ntBASIC3.67□□□□□ -1.82
APPP05067 Y_RNA.358-201ENST00000365491 99 ntBASIC3.67□□□□□ -1.82
APPP05067 Y_RNA.504-201ENST00000384481 104 ntBASIC3.67□□□□□ -1.82
APPP05067 MIR549A-201ENST00000385268 96 ntBASIC3.67□□□□□ -1.82
APPP05067 SNORA48.5-201ENST00000391143 135 ntBASIC3.67□□□□□ -1.82
APPP05067 RN7SKP58-201ENST00000411010 305 ntBASIC3.67□□□□□ -1.82
APPP05067 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.67□□□□□ -1.82
APPP05067 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.67□□□□□ -1.82
APPP05067 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.67□□□□□ -1.82
APPP05067 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.67□□□□□ -1.82
APPP05067 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.67□□□□□ -1.82
APPP05067 snoU13.6-201ENST00000458785 104 ntBASIC3.67□□□□□ -1.82
APPP05067 RPL23AP75-201ENST00000491601 451 ntBASIC3.67□□□□□ -1.82
APPP05067 HSPE1P20-201ENST00000538133 289 ntBASIC3.67□□□□□ -1.82
APPP05067 NACAP3-201ENST00000552100 481 ntBASIC3.67□□□□□ -1.82
APPP05067 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.67□□□□□ -1.82
APPP05067 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.67□□□□□ -1.82
APPP05067 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.67□□□□□ -1.82
APPP05067 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.67□□□□□ -1.82
APPP05067 AL450472.1-202ENST00000637286 180 ntBASIC3.67□□□□□ -1.82
APPP05067 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
APPP05067 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
APPP05067 AC233981.2-201ENST00000611524 1614 ntBASIC3.66□□□□□ -1.82
APPP05067 AP000560.1-201ENST00000624150 1937 ntBASIC3.66□□□□□ -1.82
APPP05067 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
APPP05067 RNA5SP383-201ENST00000362934 120 ntBASIC3.66□□□□□ -1.82
APPP05067 SNORA71.1-201ENST00000364523 117 ntBASIC3.66□□□□□ -1.82
APPP05067 SNORA51.4-201ENST00000364993 124 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms