Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC092447.9-201ENST00000603395 144 ntBASIC-0.33□□□□□ -2.46
APOBP04114 AL121652.1-201ENST00000608851 448 ntBASIC-0.33□□□□□ -2.46
APOBP04114 AL136317.1-201ENST00000612653 226 ntBASIC-0.33□□□□□ -2.46
APOBP04114 MIR103A1-201ENST00000362165 78 ntBASIC-0.33□□□□□ -2.46
APOBP04114 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.33□□□□□ -2.46
APOBP04114 SNORA75.6-201ENST00000391318 127 ntBASIC-0.33□□□□□ -2.46
APOBP04114 AC127391.1-201ENST00000411737 98 ntBASIC-0.33□□□□□ -2.46
APOBP04114 MTCO3P18-201ENST00000440206 761 ntBASIC-0.33□□□□□ -2.46
APOBP04114 RPS29P15-201ENST00000458329 171 ntBASIC-0.33□□□□□ -2.46
APOBP04114 MTCO3P7-201ENST00000510008 774 ntBASIC-0.33□□□□□ -2.46
APOBP04114 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC-0.33□□□□□ -2.46
APOBP04114 SNORA31.2-201ENST00000516019 134 ntBASIC-0.33□□□□□ -2.46
APOBP04114 AC069113.3-201ENST00000521019 150 ntBASIC-0.33□□□□□ -2.46
APOBP04114 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.33□□□□□ -2.46
APOBP04114 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.33□□□□□ -2.46
APOBP04114 AL353765.1-201ENST00000605514 183 ntBASIC-0.33□□□□□ -2.46
APOBP04114 RNY1P8-201ENST00000383970 114 ntBASIC-0.33□□□□□ -2.46
APOBP04114 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.33□□□□□ -2.46
APOBP04114 RNU6-747P-201ENST00000390928 104 ntBASIC-0.33□□□□□ -2.46
APOBP04114 RNU6-241P-201ENST00000391148 104 ntBASIC-0.33□□□□□ -2.46
APOBP04114 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.33□□□□□ -2.46
APOBP04114 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC-0.33□□□□□ -2.46
APOBP04114 TRAV32-201ENST00000553993 340 ntBASIC-0.33□□□□□ -2.46
APOBP04114 MIR3167-201ENST00000579623 85 ntBASIC-0.33□□□□□ -2.46
APOBP04114 RMST_5.1-201ENST00000618704 126 ntBASIC-0.33□□□□□ -2.46
APOBP04114 RNU1-39P-201ENST00000383897 165 ntBASIC-0.34□□□□□ -2.46
APOBP04114 SNORD99-201ENST00000408612 74 ntBASIC-0.34□□□□□ -2.46
APOBP04114 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.34□□□□□ -2.46
APOBP04114 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
APOBP04114 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.34□□□□□ -2.46
APOBP04114 RNU6-87P-201ENST00000607561 108 ntBASIC-0.34□□□□□ -2.46
APOBP04114 SNORD114-5-201ENST00000362928 70 ntBASIC-0.34□□□□□ -2.46
APOBP04114 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.34□□□□□ -2.46
APOBP04114 AL035398.1-201ENST00000430869 322 ntBASIC-0.34□□□□□ -2.46
APOBP04114 NDUFA5P10-201ENST00000432147 357 ntBASIC-0.34□□□□□ -2.46
APOBP04114 SNORD79.1-201ENST00000516069 84 ntBASIC-0.34□□□□□ -2.46
APOBP04114 RNU6-917P-201ENST00000516294 104 ntBASIC-0.34□□□□□ -2.46
APOBP04114 MIR5697-201ENST00000578045 78 ntBASIC-0.34□□□□□ -2.46
APOBP04114 AL359697.1-201ENST00000624879 587 ntBASIC-0.34□□□□□ -2.46
APOBP04114 SNORD114-12-201ENST00000365400 75 ntBASIC-0.34□□□□□ -2.46
APOBP04114 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.34□□□□□ -2.46
APOBP04114 PTP4A1P4-201ENST00000512479 322 ntBASIC-0.34□□□□□ -2.46
APOBP04114 AC011921.3-201ENST00000605540 361 ntBASIC-0.34□□□□□ -2.46
APOBP04114 AL133445.2-201ENST00000611191 527 ntBASIC-0.34□□□□□ -2.46
APOBP04114 AC008147.4-201ENST00000617570 1204 ntBASIC-0.34□□□□□ -2.46
APOBP04114 MIR520F-201ENST00000384824 87 ntBASIC-0.35□□□□□ -2.46
APOBP04114 BUD31P2-201ENST00000449374 300 ntBASIC-0.35□□□□□ -2.46
APOBP04114 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.35□□□□□ -2.46
APOBP04114 MIR548Y-201ENST00000582739 110 ntBASIC-0.35□□□□□ -2.46
APOBP04114 RNU2-49P-201ENST00000410666 184 ntBASIC-0.35□□□□□ -2.47
APOBP04114 AL353621.1-201ENST00000418219 243 ntBASIC-0.35□□□□□ -2.47
APOBP04114 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.35□□□□□ -2.47
APOBP04114 RNA5SP269-201ENST00000459032 137 ntBASIC-0.35□□□□□ -2.47
APOBP04114 RPL36AP48-201ENST00000485521 314 ntBASIC-0.35□□□□□ -2.47
APOBP04114 RNU6-667P-201ENST00000517186 102 ntBASIC-0.35□□□□□ -2.47
APOBP04114 COPS8P3-201ENST00000526024 482 ntBASIC-0.35□□□□□ -2.47
APOBP04114 AC112220.2-201ENST00000605513 533 ntBASIC-0.35□□□□□ -2.47
APOBP04114 AF129408.1-201ENST00000608767 431 ntBASIC-0.35□□□□□ -2.47
APOBP04114 RNU6-697P-201ENST00000363348 107 ntBASIC-0.35□□□□□ -2.47
APOBP04114 RPL17P35-201ENST00000432217 549 ntBASIC-0.35□□□□□ -2.47
APOBP04114 MTND1P28-201ENST00000435623 950 ntBASIC-0.35□□□□□ -2.47
APOBP04114 AC048334.1-201ENST00000477975 159 ntBASIC-0.35□□□□□ -2.47
APOBP04114 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.35□□□□□ -2.47
APOBP04114 AC004775.1-201ENST00000607389 753 ntBASIC-0.35□□□□□ -2.47
APOBP04114 RNY4P16-201ENST00000364768 94 ntBASIC-0.35□□□□□ -2.47
APOBP04114 RNU2-48P-201ENST00000410694 191 ntBASIC-0.35□□□□□ -2.47
APOBP04114 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.35□□□□□ -2.47
APOBP04114 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.35□□□□□ -2.47
APOBP04114 TIMM9P1-201ENST00000436122 256 ntBASIC-0.35□□□□□ -2.47
APOBP04114 AC098831.1-201ENST00000440661 216 ntBASIC-0.35□□□□□ -2.47
APOBP04114 AC113398.2-201ENST00000507630 558 ntBASIC-0.35□□□□□ -2.47
APOBP04114 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.35□□□□□ -2.47
APOBP04114 AC130324.3-201ENST00000614165 542 ntBASIC-0.35□□□□□ -2.47
APOBP04114 AC010809.3-201ENST00000621310 641 ntBASIC-0.35□□□□□ -2.47
APOBP04114 uc_338.16-201ENST00000621804 95 ntBASIC-0.35□□□□□ -2.47
APOBP04114 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.36□□□□□ -2.47
APOBP04114 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.36□□□□□ -2.47
APOBP04114 AC023194.1-201ENST00000493084 308 ntBASIC-0.36□□□□□ -2.47
APOBP04114 RNU6-1256P-201ENST00000516539 103 ntBASIC-0.36□□□□□ -2.47
APOBP04114 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.36□□□□□ -2.47
APOBP04114 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.36□□□□□ -2.47
APOBP04114 RNU6-374P-201ENST00000364146 108 ntBASIC-0.36□□□□□ -2.47
APOBP04114 RNU6-735P-201ENST00000410612 107 ntBASIC-0.36□□□□□ -2.47
APOBP04114 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.36□□□□□ -2.47
APOBP04114 AC011005.2-201ENST00000487324 359 ntBASIC-0.36□□□□□ -2.47
APOBP04114 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.36□□□□□ -2.47
APOBP04114 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC-0.36□□□□□ -2.47
APOBP04114 AC004853.1-201ENST00000604902 698 ntBASIC-0.36□□□□□ -2.47
APOBP04114 AC117490.2-201ENST00000610042 594 ntBASIC-0.36□□□□□ -2.47
APOBP04114 MIR18A-201ENST00000362310 71 ntBASIC-0.36□□□□□ -2.47
APOBP04114 RPL22P22-201ENST00000395439 379 ntBASIC-0.36□□□□□ -2.47
APOBP04114 RNU6-177P-201ENST00000411257 104 ntBASIC-0.36□□□□□ -2.47
APOBP04114 MTCO1P20-201ENST00000425366 358 ntBASIC-0.36□□□□□ -2.47
APOBP04114 RAB28P5-201ENST00000427490 651 ntBASIC-0.36□□□□□ -2.47
APOBP04114 RPL23AP50-201ENST00000434149 455 ntBASIC-0.36□□□□□ -2.47
APOBP04114 MTND4LP10-201ENST00000435146 291 ntBASIC-0.36□□□□□ -2.47
APOBP04114 AC104332.1-201ENST00000440471 797 ntBASIC-0.36□□□□□ -2.47
APOBP04114 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.36□□□□□ -2.47
APOBP04114 MIR4504-201ENST00000577413 92 ntBASIC-0.36□□□□□ -2.47
APOBP04114 AC018926.3-201ENST00000618841 406 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms