Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SNORA59B-202ENST00000578183 701 ntBASIC0.85□□□□□ -2.27
APOEP02649 AP005136.1-201ENST00000579765 429 ntBASIC0.85□□□□□ -2.27
APOEP02649 AL034555.1-201ENST00000604816 211 ntBASIC0.85□□□□□ -2.27
APOEP02649 AC144521.1-201ENST00000607148 956 ntBASIC0.85□□□□□ -2.27
APOEP02649 AC108706.1-201ENST00000611053 297 ntBASIC0.85□□□□□ -2.27
APOEP02649 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.85□□□□□ -2.27
APOEP02649 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.85□□□□□ -2.27
APOEP02649 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
APOEP02649 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
APOEP02649 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
APOEP02649 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
APOEP02649 AC019070.1-201ENST00000415008 1024 ntBASIC0.84□□□□□ -2.27
APOEP02649 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.84□□□□□ -2.27
APOEP02649 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.84□□□□□ -2.27
APOEP02649 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.84□□□□□ -2.27
APOEP02649 AL360271.2-201ENST00000447710 161 ntBASIC0.84□□□□□ -2.27
APOEP02649 HSPE1P13-201ENST00000451143 297 ntBASIC0.84□□□□□ -2.27
APOEP02649 RPS29P1-201ENST00000465274 159 ntBASIC0.84□□□□□ -2.27
APOEP02649 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.84□□□□□ -2.27
APOEP02649 AC079140.3-201ENST00000511111 550 ntBASIC0.84□□□□□ -2.27
APOEP02649 MTND3P5-201ENST00000512798 333 ntBASIC0.84□□□□□ -2.27
APOEP02649 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.84□□□□□ -2.27
APOEP02649 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
APOEP02649 RNA5SP481-201ENST00000516814 122 ntBASIC0.84□□□□□ -2.27
APOEP02649 AP002453.2-201ENST00000533503 320 ntBASIC0.84□□□□□ -2.27
APOEP02649 AC027514.1-201ENST00000588561 1603 ntBASIC0.83□□□□□ -2.28
APOEP02649 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
APOEP02649 RNU6-1285P-201ENST00000363480 105 ntBASIC0.83□□□□□ -2.28
APOEP02649 SNORA63D-201ENST00000364359 132 ntBASIC0.83□□□□□ -2.28
APOEP02649 RPS20P2-201ENST00000402520 389 ntBASIC0.83□□□□□ -2.28
APOEP02649 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.83□□□□□ -2.28
APOEP02649 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.83□□□□□ -2.28
APOEP02649 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.83□□□□□ -2.28
APOEP02649 RPS4XP11-201ENST00000446897 772 ntBASIC0.83□□□□□ -2.28
APOEP02649 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.83□□□□□ -2.28
APOEP02649 AC103851.1-201ENST00000506833 274 ntBASIC0.83□□□□□ -2.28
APOEP02649 FABP5P5-201ENST00000515537 406 ntBASIC0.83□□□□□ -2.28
APOEP02649 RNU6-123P-201ENST00000516163 102 ntBASIC0.83□□□□□ -2.28
APOEP02649 MTND2P7-201ENST00000521337 640 ntBASIC0.83□□□□□ -2.28
APOEP02649 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.83□□□□□ -2.28
APOEP02649 AC008088.1-201ENST00000580993 280 ntBASIC0.83□□□□□ -2.28
APOEP02649 MIR4307-201ENST00000582802 84 ntBASIC0.83□□□□□ -2.28
APOEP02649 AC110760.3-201ENST00000598794 467 ntBASIC0.83□□□□□ -2.28
APOEP02649 AL022345.2-201ENST00000606307 135 ntBASIC0.83□□□□□ -2.28
APOEP02649 RNU6-87P-201ENST00000607561 108 ntBASIC0.83□□□□□ -2.28
APOEP02649 AC068647.2-201ENST00000637380 353 ntBASIC0.83□□□□□ -2.28
APOEP02649 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.83□□□□□ -2.28
APOEP02649 AL159152.1-201ENST00000635019 2587 ntBASIC0.83□□□□□ -2.28
APOEP02649 RNU6-1019P-201ENST00000364424 107 ntBASIC0.82□□□□□ -2.28
APOEP02649 RNU6-438P-201ENST00000365561 103 ntBASIC0.82□□□□□ -2.28
APOEP02649 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
APOEP02649 RN7SKP61-201ENST00000410642 295 ntBASIC0.82□□□□□ -2.28
APOEP02649 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.82□□□□□ -2.28
APOEP02649 POLR2J4-204ENST00000418424 324 ntBASIC0.82□□□□□ -2.28
APOEP02649 MTND4P20-201ENST00000424125 869 ntBASIC0.82□□□□□ -2.28
APOEP02649 AC004941.2-201ENST00000427009 228 ntBASIC0.82□□□□□ -2.28
APOEP02649 AL591043.1-201ENST00000432461 424 ntBASIC0.82□□□□□ -2.28
APOEP02649 ATP5J2P3-201ENST00000451550 258 ntBASIC0.82□□□□□ -2.28
APOEP02649 SNRPGP9-201ENST00000456025 225 ntBASIC0.82□□□□□ -2.28
APOEP02649 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.82□□□□□ -2.28
APOEP02649 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.82□□□□□ -2.28
APOEP02649 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
APOEP02649 RNA5SP503-201ENST00000517047 117 ntBASIC0.82□□□□□ -2.28
APOEP02649 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.82□□□□□ -2.28
APOEP02649 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.82□□□□□ -2.28
APOEP02649 ADI1P3-201ENST00000549509 470 ntBASIC0.82□□□□□ -2.28
APOEP02649 HSPE1P4-201ENST00000550617 308 ntBASIC0.82□□□□□ -2.28
APOEP02649 MIR3664-201ENST00000579074 99 ntBASIC0.82□□□□□ -2.28
APOEP02649 AC012409.4-201ENST00000612923 249 ntBASIC0.82□□□□□ -2.28
APOEP02649 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
APOEP02649 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.82□□□□□ -2.28
APOEP02649 MTND4P16-201ENST00000466108 1367 ntBASIC0.82□□□□□ -2.28
APOEP02649 AC099786.3-201ENST00000565735 1410 ntBASIC0.81□□□□□ -2.28
APOEP02649 RNU6-527P-201ENST00000363425 104 ntBASIC0.81□□□□□ -2.28
APOEP02649 SNORA32.2-201ENST00000384049 122 ntBASIC0.81□□□□□ -2.28
APOEP02649 AC114491.1-201ENST00000416095 246 ntBASIC0.81□□□□□ -2.28
APOEP02649 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.81□□□□□ -2.28
APOEP02649 AC013410.2-201ENST00000422627 201 ntBASIC0.81□□□□□ -2.28
APOEP02649 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.81□□□□□ -2.28
APOEP02649 EEF1A1P39-201ENST00000440791 250 ntBASIC0.81□□□□□ -2.28
APOEP02649 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.81□□□□□ -2.28
APOEP02649 SNRPFP3-201ENST00000457792 225 ntBASIC0.81□□□□□ -2.28
APOEP02649 AC104806.1-201ENST00000508720 308 ntBASIC0.81□□□□□ -2.28
APOEP02649 SNORD60.2-201ENST00000516883 86 ntBASIC0.81□□□□□ -2.28
APOEP02649 CYCSP23-201ENST00000519781 313 ntBASIC0.81□□□□□ -2.28
APOEP02649 AC010376.1-201ENST00000522101 334 ntBASIC0.81□□□□□ -2.28
APOEP02649 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.81□□□□□ -2.28
APOEP02649 AC109446.1-201ENST00000566172 220 ntBASIC0.81□□□□□ -2.28
APOEP02649 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.81□□□□□ -2.28
APOEP02649 MTATP6P3-201ENST00000581686 676 ntBASIC0.81□□□□□ -2.28
APOEP02649 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
APOEP02649 AC080013.3-201ENST00000606839 578 ntBASIC0.81□□□□□ -2.28
APOEP02649 SNORD98-201ENST00000636377 67 ntBASIC0.81□□□□□ -2.28
APOEP02649 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.81□□□□□ -2.28
APOEP02649 RNU5E-7P-201ENST00000365290 117 ntBASIC0.8□□□□□ -2.28
APOEP02649 RNU6-1176P-201ENST00000390955 107 ntBASIC0.8□□□□□ -2.28
APOEP02649 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
APOEP02649 RPL21P1-201ENST00000399532 476 ntBASIC0.8□□□□□ -2.28
APOEP02649 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.8□□□□□ -2.28
APOEP02649 CALM2P2-201ENST00000428512 440 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms