Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC079598.5-201ENST00000547460 117 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 CR383656.8-201ENST00000549046 145 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.64□□□□□ -2.15
CTDNEP1O95476 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.64□□□□□ -2.15
CTDNEP1O95476 AL136363.2-201ENST00000604173 851 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 AC092954.2-201ENST00000609103 430 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 AL158209.2-201ENST00000619266 216 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 AC139792.3-201ENST00000623525 224 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 AC124864.2-201ENST00000624736 186 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.64□□□□□ -2.15
CTDNEP1O95476 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CTDNEP1O95476 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CTDNEP1O95476 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.63□□□□□ -2.15
CTDNEP1O95476 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CTDNEP1O95476 Z75746.1-201ENST00000440243 2080 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 RNA5SP276-201ENST00000362580 94 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 U8.1-201ENST00000362843 134 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 RNU6-78P-201ENST00000362897 107 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 Y_RNA.324-201ENST00000365165 102 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CTDNEP1O95476 RNU6-622P-201ENST00000384272 103 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 RNU6-843P-201ENST00000384454 104 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 RNU6-393P-201ENST00000384475 107 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 SNORD116-20-201ENST00000384529 92 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 SNORA67.5-201ENST00000391036 107 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 MTCO3P40-201ENST00000392516 676 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 AC074117.2-201ENST00000417130 397 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 AL513185.2-201ENST00000425543 193 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 HMGB1P31-201ENST00000437242 427 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 RPL23AP6-201ENST00000446637 472 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.63□□□□□ -2.15
CTDNEP1O95476 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.63□□□□□ -2.15
CTDNEP1O95476 CYP2C59P-201ENST00000457790 269 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 AC087884.1-201ENST00000469738 328 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 AC117503.1-201ENST00000472241 394 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 AL163973.1-201ENST00000484753 577 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 RPL36AP48-201ENST00000485521 314 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.63□□□□□ -2.15
CTDNEP1O95476 CKS1BP2-201ENST00000497342 240 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.63□□□□□ -2.15
CTDNEP1O95476 MTCYBP40-201ENST00000509390 1135 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.63□□□□□ -2.15
CTDNEP1O95476 Y_RNA.675-201ENST00000516389 149 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 AC022880.1-201ENST00000534017 973 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.63□□□□□ -2.15
CTDNEP1O95476 AC136619.2-201ENST00000563361 631 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.63□□□□□ -2.15
CTDNEP1O95476 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.63□□□□□ -2.15
CTDNEP1O95476 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.63□□□□□ -2.15
CTDNEP1O95476 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.63□□□□□ -2.15
CTDNEP1O95476 AC012507.3-201ENST00000603556 477 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 RMST_6.1-201ENST00000611980 203 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 uc_338.11-201ENST00000619132 160 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 AC022418.1-201ENST00000624118 445 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 Z69720.2-201ENST00000624755 279 ntBASIC1.63□□□□□ -2.15
CTDNEP1O95476 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
CTDNEP1O95476 Y_RNA.40-201ENST00000362645 93 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 Y_RNA.255-201ENST00000364581 97 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CTDNEP1O95476 U8.10-201ENST00000384260 133 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 RNU6-517P-201ENST00000384362 110 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 Y_RNA.517-201ENST00000384551 106 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 HMGN2P39-201ENST00000398005 273 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 AC097463.2-201ENST00000421074 142 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 AC096920.1-201ENST00000423991 241 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 C8orf59P1-201ENST00000429930 303 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.62□□□□□ -2.15
CTDNEP1O95476 PRPS1P1-201ENST00000445305 876 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.62□□□□□ -2.15
CTDNEP1O95476 AC018437.1-201ENST00000492214 406 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 AC107401.1-201ENST00000503426 685 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 AC019235.1-201ENST00000503847 207 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.62□□□□□ -2.15
CTDNEP1O95476 RNU6-835P-201ENST00000516974 104 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 AP003033.1-201ENST00000527244 415 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 AP005639.2-201ENST00000527592 928 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 AL137161.1-201ENST00000532231 390 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.62□□□□□ -2.15
CTDNEP1O95476 AL118558.2-201ENST00000556294 238 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 AC068338.1-201ENST00000565567 176 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 AC243960.4-201ENST00000600532 288 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 AC021646.1-201ENST00000605469 484 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 AC002044.1-201ENST00000606707 158 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 AF250324.2-201ENST00000608299 610 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 AC093788.1-201ENST00000609356 927 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
CTDNEP1O95476 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CTDNEP1O95476 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 AL359880.1-201ENST00000621879 266 ntBASIC1.62□□□□□ -2.15
CTDNEP1O95476 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
CTDNEP1O95476 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-661P-201ENST00000362409 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-37P-201ENST00000362692 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-529P-201ENST00000363383 104 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-11P-201ENST00000364234 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU4-20P-201ENST00000365601 151 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-25P-201ENST00000383873 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-1-201ENST00000383898 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 Y_RNA.399-201ENST00000383955 105 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms