Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 BNIP3P6-201ENST00000549284 499 ntBASIC-0.27□□□□□ -2.45
LTN1O94822 AL132657.2-201ENST00000564417 358 ntBASIC-0.27□□□□□ -2.45
LTN1O94822 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
LTN1O94822 SNORD3E-202ENST00000627253 216 ntBASIC-0.27□□□□□ -2.45
LTN1O94822 RNU6-862P-201ENST00000362804 105 ntBASIC-0.28□□□□□ -2.45
LTN1O94822 RNA5SP259-201ENST00000365541 109 ntBASIC-0.28□□□□□ -2.45
LTN1O94822 MIR520F-201ENST00000384824 87 ntBASIC-0.28□□□□□ -2.45
LTN1O94822 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.28□□□□□ -2.45
LTN1O94822 TXNL1P1-201ENST00000429528 554 ntBASIC-0.28□□□□□ -2.45
LTN1O94822 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.28□□□□□ -2.45
LTN1O94822 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.28□□□□□ -2.45
LTN1O94822 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.28□□□□□ -2.45
LTN1O94822 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-0.28□□□□□ -2.45
LTN1O94822 HMGN1P12-201ENST00000499125 195 ntBASIC-0.28□□□□□ -2.45
LTN1O94822 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.28□□□□□ -2.45
LTN1O94822 AL590229.1-201ENST00000603497 542 ntBASIC-0.28□□□□□ -2.45
LTN1O94822 AL031281.1-201ENST00000604049 488 ntBASIC-0.28□□□□□ -2.45
LTN1O94822 AC007363.1-201ENST00000604736 620 ntBASIC-0.28□□□□□ -2.45
LTN1O94822 AC010133.1-201ENST00000615809 842 ntBASIC-0.28□□□□□ -2.45
LTN1O94822 7SK.10-201ENST00000621414 298 ntBASIC-0.28□□□□□ -2.45
LTN1O94822 AC080188.3-201ENST00000624842 748 ntBASIC-0.28□□□□□ -2.45
LTN1O94822 MIR1248-201ENST00000629190 106 ntBASIC-0.28□□□□□ -2.45
LTN1O94822 RNU6-543P-201ENST00000362576 108 ntBASIC-0.29□□□□□ -2.46
LTN1O94822 MIR548B-201ENST00000385247 97 ntBASIC-0.29□□□□□ -2.46
LTN1O94822 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.29□□□□□ -2.46
LTN1O94822 AC011233.1-201ENST00000422812 283 ntBASIC-0.29□□□□□ -2.46
LTN1O94822 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.29□□□□□ -2.46
LTN1O94822 MTND1P28-201ENST00000435623 950 ntBASIC-0.29□□□□□ -2.46
LTN1O94822 CECR9-201ENST00000453421 199 ntBASIC-0.29□□□□□ -2.46
LTN1O94822 AC008628.1-201ENST00000508663 265 ntBASIC-0.29□□□□□ -2.46
LTN1O94822 RN7SKP12-201ENST00000516275 143 ntBASIC-0.29□□□□□ -2.46
LTN1O94822 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.29□□□□□ -2.46
LTN1O94822 AC090888.2-201ENST00000559765 1144 ntBASIC-0.29□□□□□ -2.46
LTN1O94822 AC022523.2-201ENST00000561045 150 ntBASIC-0.29□□□□□ -2.46
LTN1O94822 AC137800.2-201ENST00000574375 120 ntBASIC-0.29□□□□□ -2.46
LTN1O94822 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.29□□□□□ -2.46
LTN1O94822 uc_338.34-201ENST00000617467 174 ntBASIC-0.29□□□□□ -2.46
LTN1O94822 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.29□□□□□ -2.46
LTN1O94822 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.29□□□□□ -2.46
LTN1O94822 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.29□□□□□ -2.46
LTN1O94822 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.29□□□□□ -2.46
LTN1O94822 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.29□□□□□ -2.46
LTN1O94822 AC011005.2-201ENST00000487324 359 ntBASIC-0.29□□□□□ -2.46
LTN1O94822 RNU6-863P-201ENST00000515989 104 ntBASIC-0.29□□□□□ -2.46
LTN1O94822 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.29□□□□□ -2.46
LTN1O94822 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
LTN1O94822 AC011195.1-201ENST00000578177 177 ntBASIC-0.29□□□□□ -2.46
LTN1O94822 VN1R83P-201ENST00000595685 445 ntBASIC-0.29□□□□□ -2.46
LTN1O94822 SNORD118-201ENST00000363593 134 ntBASIC-0.3□□□□□ -2.46
LTN1O94822 SNORA63D-201ENST00000364359 132 ntBASIC-0.3□□□□□ -2.46
LTN1O94822 RNU6-46P-201ENST00000383860 107 ntBASIC-0.3□□□□□ -2.46
LTN1O94822 RNU6-163P-201ENST00000384396 106 ntBASIC-0.3□□□□□ -2.46
LTN1O94822 RNA5SP222-201ENST00000411039 105 ntBASIC-0.3□□□□□ -2.46
LTN1O94822 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.3□□□□□ -2.46
LTN1O94822 COX6CP10-201ENST00000416832 224 ntBASIC-0.3□□□□□ -2.46
LTN1O94822 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.3□□□□□ -2.46
LTN1O94822 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.3□□□□□ -2.46
LTN1O94822 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC-0.3□□□□□ -2.46
LTN1O94822 AC012308.1-201ENST00000451232 178 ntBASIC-0.3□□□□□ -2.46
LTN1O94822 RNU1-131P-201ENST00000458943 161 ntBASIC-0.3□□□□□ -2.46
LTN1O94822 OARD1-209ENST00000471367 401 ntTSL 2 BASIC-0.3□□□□□ -2.46
LTN1O94822 HMGB1P29-201ENST00000505659 499 ntBASIC-0.3□□□□□ -2.46
LTN1O94822 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.3□□□□□ -2.46
LTN1O94822 AC120349.3-201ENST00000624377 529 ntBASIC-0.3□□□□□ -2.46
LTN1O94822 ENSAP3-201ENST00000312710 333 ntBASIC-0.31□□□□□ -2.46
LTN1O94822 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.31□□□□□ -2.46
LTN1O94822 RNU1-39P-201ENST00000383897 165 ntBASIC-0.31□□□□□ -2.46
LTN1O94822 MIR938-201ENST00000401216 83 ntBASIC-0.31□□□□□ -2.46
LTN1O94822 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-0.31□□□□□ -2.46
LTN1O94822 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.31□□□□□ -2.46
LTN1O94822 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-0.31□□□□□ -2.46
LTN1O94822 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.31□□□□□ -2.46
LTN1O94822 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-0.31□□□□□ -2.46
LTN1O94822 MIR4431-201ENST00000579990 94 ntBASIC-0.31□□□□□ -2.46
LTN1O94822 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.31□□□□□ -2.46
LTN1O94822 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-0.31□□□□□ -2.46
LTN1O94822 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-0.31□□□□□ -2.46
LTN1O94822 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.31□□□□□ -2.46
LTN1O94822 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
LTN1O94822 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
LTN1O94822 RNY3P5-201ENST00000384127 102 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 RNA5SP496-201ENST00000391240 109 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 MTCO3P1-205ENST00000422088 832 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 AC073910.1-201ENST00000445047 438 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 AC009646.1-201ENST00000510455 318 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-0.32□□□□□ -2.46
LTN1O94822 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-0.32□□□□□ -2.46
LTN1O94822 AL020997.3-201ENST00000602843 359 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 AL513534.2-201ENST00000603836 250 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 SNORA32.1-201ENST00000364514 115 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
LTN1O94822 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
LTN1O94822 AL357139.1-201ENST00000407792 426 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 AC114982.2-201ENST00000461396 358 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 RPL32P14-201ENST00000463196 378 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms