Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RNU6-451P-201ENST00000362921 107 ntBASIC2.38□□□□□ -2.03
BEST1O76090 MIR221-201ENST00000385135 110 ntBASIC2.38□□□□□ -2.03
BEST1O76090 SNORA40.19-201ENST00000390846 128 ntBASIC2.38□□□□□ -2.03
BEST1O76090 RNA5SP181-201ENST00000410246 98 ntBASIC2.38□□□□□ -2.03
BEST1O76090 RNU2-48P-201ENST00000410694 191 ntBASIC2.38□□□□□ -2.03
BEST1O76090 MTCO1P21-201ENST00000416634 589 ntBASIC2.38□□□□□ -2.03
BEST1O76090 SNRPEP10-201ENST00000420249 274 ntBASIC2.38□□□□□ -2.03
BEST1O76090 AL590135.1-201ENST00000422215 156 ntBASIC2.38□□□□□ -2.03
BEST1O76090 AC019205.3-201ENST00000424573 156 ntBASIC2.38□□□□□ -2.03
BEST1O76090 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.38□□□□□ -2.03
BEST1O76090 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.38□□□□□ -2.03
BEST1O76090 AC016700.2-201ENST00000446011 156 ntBASIC2.38□□□□□ -2.03
BEST1O76090 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.38□□□□□ -2.03
BEST1O76090 AC015911.1-201ENST00000495111 156 ntBASIC2.38□□□□□ -2.03
BEST1O76090 AC007375.1-201ENST00000554513 578 ntBASIC2.38□□□□□ -2.03
BEST1O76090 AC100830.2-201ENST00000581636 240 ntBASIC2.38□□□□□ -2.03
BEST1O76090 MIR3945-201ENST00000581853 98 ntBASIC2.38□□□□□ -2.03
BEST1O76090 BNIP3P25-201ENST00000596023 559 ntBASIC2.38□□□□□ -2.03
BEST1O76090 AL132822.1-201ENST00000617063 513 ntBASIC2.38□□□□□ -2.03
BEST1O76090 AC012640.5-201ENST00000623897 319 ntBASIC2.38□□□□□ -2.03
BEST1O76090 AC068137.4-201ENST00000638485 296 ntBASIC2.38□□□□□ -2.03
BEST1O76090 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
BEST1O76090 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
BEST1O76090 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
BEST1O76090 Y_RNA.573-201ENST00000384763 105 ntBASIC2.37□□□□□ -2.03
BEST1O76090 RN7SKP223-201ENST00000410582 62 ntBASIC2.37□□□□□ -2.03
BEST1O76090 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.37□□□□□ -2.03
BEST1O76090 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.37□□□□□ -2.03
BEST1O76090 IFNA20P-201ENST00000436840 528 ntBASIC2.37□□□□□ -2.03
BEST1O76090 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.37□□□□□ -2.03
BEST1O76090 AL137159.1-201ENST00000452808 512 ntBASIC2.37□□□□□ -2.03
BEST1O76090 U8.21-201ENST00000459536 136 ntBASIC2.37□□□□□ -2.03
BEST1O76090 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.37□□□□□ -2.03
BEST1O76090 MTND1P5-201ENST00000517906 940 ntBASIC2.37□□□□□ -2.03
BEST1O76090 AC233702.2-202ENST00000562547 291 ntBASIC2.37□□□□□ -2.03
BEST1O76090 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.37□□□□□ -2.03
BEST1O76090 AC064836.2-201ENST00000609491 462 ntBASIC2.37□□□□□ -2.03
BEST1O76090 AC063943.3-201ENST00000615562 356 ntBASIC2.37□□□□□ -2.03
BEST1O76090 MTND4P23-201ENST00000447723 1363 ntBASIC2.36□□□□□ -2.03
BEST1O76090 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
BEST1O76090 RNU4-15P-201ENST00000362613 141 ntBASIC2.36□□□□□ -2.03
BEST1O76090 RNU6-1215P-201ENST00000384441 102 ntBASIC2.36□□□□□ -2.03
BEST1O76090 BTF3L4P2-201ENST00000392798 346 ntBASIC2.36□□□□□ -2.03
BEST1O76090 RNU6-373P-201ENST00000411247 98 ntBASIC2.36□□□□□ -2.03
BEST1O76090 UBE2V1P4-201ENST00000425374 344 ntBASIC2.36□□□□□ -2.03
BEST1O76090 MRPS10P2-201ENST00000431226 381 ntBASIC2.36□□□□□ -2.03
BEST1O76090 CR769767.1-201ENST00000436337 346 ntBASIC2.36□□□□□ -2.03
BEST1O76090 NDUFA5P4-201ENST00000436704 385 ntBASIC2.36□□□□□ -2.03
BEST1O76090 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.36□□□□□ -2.03
BEST1O76090 AC083904.1-201ENST00000487828 231 ntBASIC2.36□□□□□ -2.03
BEST1O76090 AC008628.2-201ENST00000502605 298 ntBASIC2.36□□□□□ -2.03
BEST1O76090 AC114801.2-201ENST00000503825 781 ntBASIC2.36□□□□□ -2.03
BEST1O76090 RNU6-567P-201ENST00000516746 107 ntBASIC2.36□□□□□ -2.03
BEST1O76090 RNU6-612P-201ENST00000516909 102 ntBASIC2.36□□□□□ -2.03
BEST1O76090 SNORA31.25-201ENST00000517242 134 ntBASIC2.36□□□□□ -2.03
BEST1O76090 AC107953.1-201ENST00000522216 297 ntBASIC2.36□□□□□ -2.03
BEST1O76090 MTND1P35-201ENST00000526739 508 ntBASIC2.36□□□□□ -2.03
BEST1O76090 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.36□□□□□ -2.03
BEST1O76090 AP002770.2-201ENST00000543613 532 ntBASIC2.36□□□□□ -2.03
BEST1O76090 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.36□□□□□ -2.03
BEST1O76090 TRAV32-201ENST00000553993 340 ntBASIC2.36□□□□□ -2.03
BEST1O76090 RPS3AP23-202ENST00000574601 686 ntBASIC2.36□□□□□ -2.03
BEST1O76090 MIR3923-201ENST00000579521 83 ntBASIC2.36□□□□□ -2.03
BEST1O76090 AL031274.2-201ENST00000599419 203 ntBASIC2.36□□□□□ -2.03
BEST1O76090 AC005858.4-201ENST00000623191 700 ntBASIC2.36□□□□□ -2.03
BEST1O76090 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.36□□□□□ -2.03
BEST1O76090 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
BEST1O76090 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.35□□□□□ -2.03
BEST1O76090 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
BEST1O76090 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
BEST1O76090 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.35□□□□□ -2.03
BEST1O76090 RNU6-227P-201ENST00000362865 103 ntBASIC2.35□□□□□ -2.03
BEST1O76090 RNU6-1090P-201ENST00000364065 94 ntBASIC2.35□□□□□ -2.03
BEST1O76090 Y_RNA.256-201ENST00000364594 104 ntBASIC2.35□□□□□ -2.03
BEST1O76090 RNU6-128P-201ENST00000383976 107 ntBASIC2.35□□□□□ -2.03
BEST1O76090 Y_RNA.450-201ENST00000384198 113 ntBASIC2.35□□□□□ -2.03
BEST1O76090 Y_RNA.516-201ENST00000384541 124 ntBASIC2.35□□□□□ -2.03
BEST1O76090 Y_RNA.554-201ENST00000384672 102 ntBASIC2.35□□□□□ -2.03
BEST1O76090 MIR450B-201ENST00000401182 78 ntBASIC2.35□□□□□ -2.03
BEST1O76090 MIR1294-201ENST00000408503 142 ntBASIC2.35□□□□□ -2.03
BEST1O76090 AL139415.2-201ENST00000431968 163 ntBASIC2.35□□□□□ -2.03
BEST1O76090 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.35□□□□□ -2.03
BEST1O76090 RPL9P9-202ENST00000466501 579 ntBASIC2.35□□□□□ -2.03
BEST1O76090 AC132942.1-201ENST00000486753 483 ntBASIC2.35□□□□□ -2.03
BEST1O76090 AC145146.1-201ENST00000496370 254 ntBASIC2.35□□□□□ -2.03
BEST1O76090 TRBVA-201ENST00000498804 316 ntBASIC2.35□□□□□ -2.03
BEST1O76090 RNA5SP82-201ENST00000516707 92 ntBASIC2.35□□□□□ -2.03
BEST1O76090 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.35□□□□□ -2.03
BEST1O76090 AC021231.3-201ENST00000558497 370 ntBASIC2.35□□□□□ -2.03
BEST1O76090 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.35□□□□□ -2.03
BEST1O76090 AC078899.2-201ENST00000595282 212 ntBASIC2.35□□□□□ -2.03
BEST1O76090 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.35□□□□□ -2.03
BEST1O76090 AL137847.3-201ENST00000611521 109 ntBASIC2.35□□□□□ -2.03
BEST1O76090 AC139792.2-201ENST00000624218 587 ntBASIC2.35□□□□□ -2.03
BEST1O76090 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.35□□□□□ -2.03
BEST1O76090 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
BEST1O76090 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
BEST1O76090 RNU6-254P-201ENST00000363377 107 ntBASIC2.34□□□□□ -2.03
BEST1O76090 Y_RNA.373-201ENST00000365600 103 ntBASIC2.34□□□□□ -2.03
BEST1O76090 Y_RNA.504-201ENST00000384481 104 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms