Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 U3.19-201ENST00000390893 196 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 PTMAP2-201ENST00000397627 327 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 MRPL35P1-201ENST00000404272 572 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 RNU6-1203P-201ENST00000410703 110 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 RPS26P42-201ENST00000413485 326 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 CYCSP48-201ENST00000417124 323 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 AC006539.3-201ENST00000454258 129 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 AP000705.1-201ENST00000454567 350 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 RNU7-170P-201ENST00000459303 61 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 RNU6-579P-201ENST00000516879 102 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 RNU6-711P-201ENST00000517255 106 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.12□□□□□ -1.75
PRPF40AO75400 MIR4474-201ENST00000579189 78 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 MIR3128-201ENST00000581957 66 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 AC012493.2-201ENST00000595083 291 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 AL391813.1-201ENST00000603098 260 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 AL078605.1-201ENST00000603529 500 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 CR392039.5-201ENST00000623201 510 ntBASIC4.12□□□□□ -1.75
PRPF40AO75400 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF40AO75400 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF40AO75400 AL513302.2-201ENST00000562313 1842 ntBASIC4.11□□□□□ -1.75
PRPF40AO75400 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF40AO75400 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF40AO75400 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF40AO75400 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF40AO75400 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PRPF40AO75400 RNU6-1010P-201ENST00000362757 107 ntBASIC4.11□□□□□ -1.75
PRPF40AO75400 RNU1-105P-201ENST00000363470 161 ntBASIC4.11□□□□□ -1.75
PRPF40AO75400 Y_RNA.257-201ENST00000364596 102 ntBASIC4.11□□□□□ -1.75
PRPF40AO75400 SNORA20.1-201ENST00000364790 130 ntBASIC4.11□□□□□ -1.75
PRPF40AO75400 RNU6-281P-201ENST00000384212 103 ntBASIC4.11□□□□□ -1.75
PRPF40AO75400 Y_RNA.477-201ENST00000384352 108 ntBASIC4.11□□□□□ -1.75
PRPF40AO75400 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PRPF40AO75400 RNA5SP213-201ENST00000391031 106 ntBASIC4.11□□□□□ -1.75
PRPF40AO75400 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PRPF40AO75400 RNU6-1001P-201ENST00000411265 100 ntBASIC4.11□□□□□ -1.75
PRPF40AO75400 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.11□□□□□ -1.75
PRPF40AO75400 AC004383.1-201ENST00000438135 289 ntBASIC4.11□□□□□ -1.75
PRPF40AO75400 RN7SKP49-201ENST00000516675 260 ntBASIC4.11□□□□□ -1.75
PRPF40AO75400 MIR5047-201ENST00000579212 100 ntBASIC4.11□□□□□ -1.75
PRPF40AO75400 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.11□□□□□ -1.75
PRPF40AO75400 RNU1-30P-201ENST00000606575 163 ntBASIC4.11□□□□□ -1.75
PRPF40AO75400 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.11□□□□□ -1.75
PRPF40AO75400 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.11□□□□□ -1.75
PRPF40AO75400 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF40AO75400 RNU6-937P-201ENST00000384325 106 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 Y_RNA.518-201ENST00000384552 113 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 MIR215-201ENST00000384858 110 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PRPF40AO75400 RNU6-1093P-201ENST00000391194 107 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 RNU2-20P-201ENST00000410425 191 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 Y_RNA.602-201ENST00000410535 92 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.1□□□□□ -1.75
PRPF40AO75400 AL139247.1-201ENST00000422768 325 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 ARL5AP4-201ENST00000430731 512 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.1□□□□□ -1.75
PRPF40AO75400 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.1□□□□□ -1.75
PRPF40AO75400 AL357552.1-201ENST00000445254 415 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 HMGB1P35-201ENST00000503360 598 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.1□□□□□ -1.75
PRPF40AO75400 CYP4A27P-201ENST00000567218 190 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.1□□□□□ -1.75
PRPF40AO75400 MIR4429-201ENST00000580105 73 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 MIR5187-201ENST00000583479 76 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 AL162713.1-201ENST00000604480 262 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 AC073657.2-201ENST00000605661 303 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 AC069200.1-201ENST00000609511 323 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 AC078938.1-201ENST00000620993 318 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.1□□□□□ -1.75
PRPF40AO75400 AL079305.1-201ENST00000623159 3008 ntBASIC4.1□□□□□ -1.75
PRPF40AO75400 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF40AO75400 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF40AO75400 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF40AO75400 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.09□□□□□ -1.75
PRPF40AO75400 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF40AO75400 RNU1-75P-201ENST00000347264 129 ntBASIC4.09□□□□□ -1.75
PRPF40AO75400 Y_RNA.60-201ENST00000362831 98 ntBASIC4.09□□□□□ -1.75
PRPF40AO75400 Y_RNA.562-201ENST00000384695 113 ntBASIC4.09□□□□□ -1.75
PRPF40AO75400 MIR208B-201ENST00000401172 77 ntBASIC4.09□□□□□ -1.75
PRPF40AO75400 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.09□□□□□ -1.75
PRPF40AO75400 GOT2P5-201ENST00000433995 546 ntBASIC4.09□□□□□ -1.75
PRPF40AO75400 AP001324.2-201ENST00000461163 319 ntBASIC4.09□□□□□ -1.75
PRPF40AO75400 RNU6-1023P-201ENST00000516137 106 ntBASIC4.09□□□□□ -1.75
PRPF40AO75400 Y_RNA.680-201ENST00000516441 93 ntBASIC4.09□□□□□ -1.75
PRPF40AO75400 AC087499.8-201ENST00000578406 226 ntBASIC4.09□□□□□ -1.75
PRPF40AO75400 AL034555.1-201ENST00000604816 211 ntBASIC4.09□□□□□ -1.75
PRPF40AO75400 AL137843.1-201ENST00000605078 385 ntBASIC4.09□□□□□ -1.75
PRPF40AO75400 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.09□□□□□ -1.75
PRPF40AO75400 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.09□□□□□ -1.75
PRPF40AO75400 AL121772.2-201ENST00000614331 297 ntBASIC4.09□□□□□ -1.75
PRPF40AO75400 AC039056.2-201ENST00000622261 511 ntBASIC4.09□□□□□ -1.75
PRPF40AO75400 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF40AO75400 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF40AO75400 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.09□□□□□ -1.76
PRPF40AO75400 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.09□□□□□ -1.76
PRPF40AO75400 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
PRPF40AO75400 AL161912.2-201ENST00000565707 3007 ntBASIC4.08□□□□□ -1.76
PRPF40AO75400 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms