Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 MRPL42P2-201ENST00000403169 426 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.39□□□□□ -2.19
NPHP4O75161 EEF1A1P40-201ENST00000412883 573 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 VN1R36P-201ENST00000414936 291 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 AC011233.1-201ENST00000422812 283 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 MTCYBP5-201ENST00000423752 1135 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 MTCYBP39-201ENST00000437562 491 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 ZNF114P1-201ENST00000453500 292 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.39□□□□□ -2.19
NPHP4O75161 MRPS36P3-201ENST00000519284 130 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 AC022616.8-201ENST00000533569 253 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 AL356057.1-201ENST00000533798 831 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
NPHP4O75161 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
NPHP4O75161 BNIP3P25-201ENST00000596023 559 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 AC016597.2-201ENST00000613256 341 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 AC097372.5-201ENST00000623665 376 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 MIR1248-201ENST00000629190 106 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 Y_RNA.22-201ENST00000362492 102 ntBASIC1.38□□□□□ -2.19
NPHP4O75161 RNU6-1214P-201ENST00000363650 109 ntBASIC1.38□□□□□ -2.19
NPHP4O75161 RNU5F-7P-201ENST00000363696 115 ntBASIC1.38□□□□□ -2.19
NPHP4O75161 RNU6-61P-201ENST00000365528 109 ntBASIC1.38□□□□□ -2.19
NPHP4O75161 Y_RNA.597-201ENST00000410463 100 ntBASIC1.38□□□□□ -2.19
NPHP4O75161 RNA5SP501-201ENST00000410990 112 ntBASIC1.38□□□□□ -2.19
NPHP4O75161 C1DP2-201ENST00000418167 426 ntBASIC1.38□□□□□ -2.19
NPHP4O75161 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.38□□□□□ -2.19
NPHP4O75161 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.38□□□□□ -2.19
NPHP4O75161 AL356583.2-201ENST00000426536 280 ntBASIC1.38□□□□□ -2.19
NPHP4O75161 AC137499.1-201ENST00000427602 88 ntBASIC1.38□□□□□ -2.19
NPHP4O75161 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.38□□□□□ -2.19
NPHP4O75161 AL122001.1-201ENST00000457027 370 ntBASIC1.38□□□□□ -2.19
NPHP4O75161 RPL30P6-201ENST00000475925 342 ntBASIC1.38□□□□□ -2.19
NPHP4O75161 MTND3P25-201ENST00000509243 135 ntBASIC1.38□□□□□ -2.19
NPHP4O75161 AC009646.1-201ENST00000510455 318 ntBASIC1.38□□□□□ -2.19
NPHP4O75161 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.38□□□□□ -2.19
NPHP4O75161 AP003461.1-201ENST00000528866 78 ntBASIC1.38□□□□□ -2.19
NPHP4O75161 AP002453.2-201ENST00000533503 320 ntBASIC1.38□□□□□ -2.19
NPHP4O75161 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.38□□□□□ -2.19
NPHP4O75161 AC008751.2-201ENST00000597885 980 ntBASIC1.38□□□□□ -2.19
NPHP4O75161 OR4G2P-201ENST00000328113 903 ntBASIC1.37□□□□□ -2.19
NPHP4O75161 MIR126-201ENST00000362291 85 ntBASIC1.37□□□□□ -2.19
NPHP4O75161 SNORA62.1-201ENST00000364287 154 ntBASIC1.37□□□□□ -2.19
NPHP4O75161 Y_RNA.258-201ENST00000364613 105 ntBASIC1.37□□□□□ -2.19
NPHP4O75161 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
NPHP4O75161 MIR558-201ENST00000384920 94 ntBASIC1.37□□□□□ -2.19
NPHP4O75161 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
NPHP4O75161 AL593851.1-201ENST00000426171 157 ntBASIC1.37□□□□□ -2.19
NPHP4O75161 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.37□□□□□ -2.19
NPHP4O75161 MTND5P2-201ENST00000442927 1142 ntBASIC1.37□□□□□ -2.19
NPHP4O75161 AC117522.1-201ENST00000509821 380 ntBASIC1.37□□□□□ -2.19
NPHP4O75161 CBX3P8-201ENST00000532412 525 ntBASIC1.37□□□□□ -2.19
NPHP4O75161 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.37□□□□□ -2.19
NPHP4O75161 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.37□□□□□ -2.19
NPHP4O75161 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.37□□□□□ -2.19
NPHP4O75161 AL121992.2-201ENST00000606262 256 ntBASIC1.37□□□□□ -2.19
NPHP4O75161 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.37□□□□□ -2.19
NPHP4O75161 AP000240.1-201ENST00000609910 452 ntBASIC1.37□□□□□ -2.19
NPHP4O75161 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.37□□□□□ -2.19
NPHP4O75161 AC026585.1-201ENST00000619582 524 ntBASIC1.37□□□□□ -2.19
NPHP4O75161 SCARNA4-202ENST00000625402 129 ntBASIC1.37□□□□□ -2.19
NPHP4O75161 AC019226.2-201ENST00000625973 424 ntBASIC1.37□□□□□ -2.19
NPHP4O75161 AC006927.3-201ENST00000638789 384 ntBASIC1.37□□□□□ -2.19
NPHP4O75161 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
NPHP4O75161 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.36□□□□□ -2.19
NPHP4O75161 RNU6-500P-201ENST00000362349 107 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 RNU5E-5P-201ENST00000365379 116 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 MIR29C-201ENST00000385231 88 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 RNU11-5P-201ENST00000391216 129 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 RNA5SP390-201ENST00000410191 113 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 RPS24P1-201ENST00000438550 371 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.36□□□□□ -2.19
NPHP4O75161 AC093259.1-201ENST00000509755 300 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.36□□□□□ -2.19
NPHP4O75161 AC022616.3-201ENST00000523940 148 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.36□□□□□ -2.19
NPHP4O75161 AL160236.1-201ENST00000556317 195 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 MIR3908-201ENST00000579798 126 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 AL359999.1-201ENST00000604513 294 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 AL022345.1-201ENST00000607292 135 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 AC103810.8-201ENST00000607347 118 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 AL159153.1-201ENST00000619688 317 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 MIR6513-201ENST00000621188 64 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 AC009878.1-201ENST00000621819 340 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 RMST_7.1-201ENST00000621935 268 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 AC245060.5-201ENST00000610778 3293 ntBASIC1.36□□□□□ -2.19
NPHP4O75161 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
NPHP4O75161 MIR1285-1-201ENST00000408593 84 ntBASIC1.35□□□□□ -2.19
NPHP4O75161 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.35□□□□□ -2.19
NPHP4O75161 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.35□□□□□ -2.19
NPHP4O75161 USP9YP18-201ENST00000425912 695 ntBASIC1.35□□□□□ -2.19
NPHP4O75161 RPS15AP10-201ENST00000432472 382 ntBASIC1.35□□□□□ -2.19
NPHP4O75161 RPL39P29-201ENST00000447779 157 ntBASIC1.35□□□□□ -2.19
NPHP4O75161 snoU13.14-201ENST00000459372 104 ntBASIC1.35□□□□□ -2.19
NPHP4O75161 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.35□□□□□ -2.19
NPHP4O75161 AC022254.1-201ENST00000567857 235 ntBASIC1.35□□□□□ -2.19
NPHP4O75161 MIR4713-201ENST00000582691 75 ntBASIC1.35□□□□□ -2.19
NPHP4O75161 AC005771.1-201ENST00000585581 349 ntBASIC1.35□□□□□ -2.19
NPHP4O75161 AC073539.2-201ENST00000597113 165 ntBASIC1.35□□□□□ -2.19
NPHP4O75161 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms