Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 TCL6_2.1-201ENST00000615162 119 ntBASIC4.91□□□□□ -1.62
RNF40O75150 AC006133.1-201ENST00000617106 264 ntBASIC4.91□□□□□ -1.62
RNF40O75150 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF40O75150 AL022401.1-201ENST00000619498 108 ntBASIC4.91□□□□□ -1.62
RNF40O75150 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF40O75150 MIR6830-201ENST00000636015 70 ntBASIC4.91□□□□□ -1.62
RNF40O75150 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF40O75150 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
RNF40O75150 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
RNF40O75150 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF40O75150 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF40O75150 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RNF40O75150 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF40O75150 AC022893.2-201ENST00000564832 3296 ntBASIC4.91□□□□□ -1.62
RNF40O75150 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.9□□□□□ -1.62
RNF40O75150 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.9□□□□□ -1.62
RNF40O75150 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.9□□□□□ -1.62
RNF40O75150 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RNF40O75150 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.9□□□□□ -1.62
RNF40O75150 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
RNF40O75150 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
RNF40O75150 RNU6-600P-201ENST00000362524 99 ntBASIC4.9□□□□□ -1.63
RNF40O75150 SNORA72-201ENST00000384339 132 ntBASIC4.9□□□□□ -1.63
RNF40O75150 MIR93-201ENST00000385024 80 ntBASIC4.9□□□□□ -1.63
RNF40O75150 RNU6-1197P-201ENST00000391183 107 ntBASIC4.9□□□□□ -1.63
RNF40O75150 RNU2-55P-201ENST00000411146 174 ntBASIC4.9□□□□□ -1.63
RNF40O75150 AC126124.2-201ENST00000413542 321 ntBASIC4.9□□□□□ -1.63
RNF40O75150 HMGN2P32-201ENST00000444648 269 ntBASIC4.9□□□□□ -1.63
RNF40O75150 HMGN2P10-201ENST00000448085 265 ntBASIC4.9□□□□□ -1.63
RNF40O75150 AC090515.1-201ENST00000465295 476 ntBASIC4.9□□□□□ -1.63
RNF40O75150 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.9□□□□□ -1.63
RNF40O75150 RNU1-117P-201ENST00000517041 158 ntBASIC4.9□□□□□ -1.63
RNF40O75150 AL137843.1-201ENST00000605078 385 ntBASIC4.9□□□□□ -1.63
RNF40O75150 AL356218.2-201ENST00000605264 187 ntBASIC4.9□□□□□ -1.63
RNF40O75150 AC093732.2-201ENST00000607950 274 ntBASIC4.9□□□□□ -1.63
RNF40O75150 AL023881.1-201ENST00000621088 301 ntBASIC4.9□□□□□ -1.63
RNF40O75150 MIR1245B-201ENST00000636115 69 ntBASIC4.9□□□□□ -1.63
RNF40O75150 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RNF40O75150 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.9□□□□□ -1.63
RNF40O75150 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF40O75150 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF40O75150 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF40O75150 AL356489.2-201ENST00000566968 3528 ntBASIC4.89□□□□□ -1.63
RNF40O75150 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
RNF40O75150 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF40O75150 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF40O75150 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF40O75150 SNORD114-7-201ENST00000362520 77 ntBASIC4.89□□□□□ -1.63
RNF40O75150 Y_RNA.85-201ENST00000363014 111 ntBASIC4.89□□□□□ -1.63
RNF40O75150 RNA5SP447-201ENST00000363749 119 ntBASIC4.89□□□□□ -1.63
RNF40O75150 RNU6-756P-201ENST00000383997 107 ntBASIC4.89□□□□□ -1.63
RNF40O75150 Y_RNA.432-201ENST00000384087 111 ntBASIC4.89□□□□□ -1.63
RNF40O75150 U8.12-201ENST00000384701 133 ntBASIC4.89□□□□□ -1.63
RNF40O75150 AC005300.1-201ENST00000428401 373 ntBASIC4.89□□□□□ -1.63
RNF40O75150 AL356535.1-201ENST00000440335 398 ntBASIC4.89□□□□□ -1.63
RNF40O75150 NDUFS5P3-201ENST00000450668 321 ntBASIC4.89□□□□□ -1.63
RNF40O75150 AC097639.2-201ENST00000603159 172 ntBASIC4.89□□□□□ -1.63
RNF40O75150 AL138880.2-201ENST00000616214 239 ntBASIC4.89□□□□□ -1.63
RNF40O75150 AC009831.4-201ENST00000620744 325 ntBASIC4.89□□□□□ -1.63
RNF40O75150 AC018692.3-201ENST00000623929 123 ntBASIC4.89□□□□□ -1.63
RNF40O75150 MIR6715B-201ENST00000637172 77 ntBASIC4.89□□□□□ -1.63
RNF40O75150 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF40O75150 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF40O75150 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF40O75150 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RNF40O75150 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RNF40O75150 AC016588.2-201ENST00000632484 3021 ntBASIC4.88□□□□□ -1.63
RNF40O75150 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF40O75150 Y_RNA.124-201ENST00000363339 93 ntBASIC4.88□□□□□ -1.63
RNF40O75150 U3.8-201ENST00000363675 217 ntBASIC4.88□□□□□ -1.63
RNF40O75150 RNA5SP173-201ENST00000364857 136 ntBASIC4.88□□□□□ -1.63
RNF40O75150 Y_RNA.587-201ENST00000391210 103 ntBASIC4.88□□□□□ -1.63
RNF40O75150 RPEP3-201ENST00000425462 676 ntBASIC4.88□□□□□ -1.63
RNF40O75150 AL732292.1-201ENST00000426692 226 ntBASIC4.88□□□□□ -1.63
RNF40O75150 NDUFB4P6-201ENST00000436819 366 ntBASIC4.88□□□□□ -1.63
RNF40O75150 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF40O75150 AC091868.1-201ENST00000508746 304 ntBASIC4.88□□□□□ -1.63
RNF40O75150 RNA5SP446-201ENST00000515955 82 ntBASIC4.88□□□□□ -1.63
RNF40O75150 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.88□□□□□ -1.63
RNF40O75150 PRELID2P1-201ENST00000552837 301 ntBASIC4.88□□□□□ -1.63
RNF40O75150 SNORA74C-1-201ENST00000580726 201 ntBASIC4.88□□□□□ -1.63
RNF40O75150 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF40O75150 AC000403.1-201ENST00000613696 3585 ntBASIC4.88□□□□□ -1.63
RNF40O75150 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF40O75150 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RNF40O75150 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
RNF40O75150 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RNF40O75150 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF40O75150 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF40O75150 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RNF40O75150 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF40O75150 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF40O75150 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RNF40O75150 Y_RNA.163-201ENST00000363702 113 ntBASIC4.87□□□□□ -1.63
RNF40O75150 MIR488-201ENST00000365739 83 ntBASIC4.87□□□□□ -1.63
RNF40O75150 SNORA51.10-201ENST00000384418 136 ntBASIC4.87□□□□□ -1.63
RNF40O75150 RNA5SP496-201ENST00000391240 109 ntBASIC4.87□□□□□ -1.63
RNF40O75150 RNA5SP397-201ENST00000391323 118 ntBASIC4.87□□□□□ -1.63
RNF40O75150 RNA5SP104-201ENST00000410989 118 ntBASIC4.87□□□□□ -1.63
RNF40O75150 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms