Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.19□□□□□ -2.06
SNX3O60493 RNU6-864P-201ENST00000516256 108 ntBASIC2.19□□□□□ -2.06
SNX3O60493 RNU1-40P-201ENST00000516816 164 ntBASIC2.19□□□□□ -2.06
SNX3O60493 RNU1-97P-201ENST00000516872 164 ntBASIC2.19□□□□□ -2.06
SNX3O60493 RNU6-273P-201ENST00000516937 96 ntBASIC2.19□□□□□ -2.06
SNX3O60493 SNORA48.11-201ENST00000517015 89 ntBASIC2.19□□□□□ -2.06
SNX3O60493 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.19□□□□□ -2.06
SNX3O60493 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.19□□□□□ -2.06
SNX3O60493 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.19□□□□□ -2.06
SNX3O60493 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.19□□□□□ -2.06
SNX3O60493 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.19□□□□□ -2.06
SNX3O60493 MIR4448-201ENST00000584360 86 ntBASIC2.19□□□□□ -2.06
SNX3O60493 AC060780.3-201ENST00000589464 80 ntBASIC2.19□□□□□ -2.06
SNX3O60493 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.19□□□□□ -2.06
SNX3O60493 AC009831.4-201ENST00000620744 325 ntBASIC2.19□□□□□ -2.06
SNX3O60493 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SNX3O60493 MIR208A-201ENST00000362287 71 ntBASIC2.18□□□□□ -2.06
SNX3O60493 RNU6-227P-201ENST00000362865 103 ntBASIC2.18□□□□□ -2.06
SNX3O60493 Y_RNA.135-201ENST00000363439 95 ntBASIC2.18□□□□□ -2.06
SNX3O60493 Y_RNA.212-201ENST00000364177 102 ntBASIC2.18□□□□□ -2.06
SNX3O60493 RNA5SP160-201ENST00000364866 120 ntBASIC2.18□□□□□ -2.06
SNX3O60493 Y_RNA.504-201ENST00000384481 104 ntBASIC2.18□□□□□ -2.06
SNX3O60493 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SNX3O60493 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.18□□□□□ -2.06
SNX3O60493 AL590135.1-201ENST00000422215 156 ntBASIC2.18□□□□□ -2.06
SNX3O60493 AC019205.3-201ENST00000424573 156 ntBASIC2.18□□□□□ -2.06
SNX3O60493 MTND1P2-201ENST00000430604 821 ntBASIC2.18□□□□□ -2.06
SNX3O60493 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.18□□□□□ -2.06
SNX3O60493 AC105272.1-201ENST00000438604 198 ntBASIC2.18□□□□□ -2.06
SNX3O60493 AC016700.2-201ENST00000446011 156 ntBASIC2.18□□□□□ -2.06
SNX3O60493 MTND1P11-201ENST00000456661 876 ntBASIC2.18□□□□□ -2.06
SNX3O60493 RPS3P1-201ENST00000456781 192 ntBASIC2.18□□□□□ -2.06
SNX3O60493 U8.21-201ENST00000459536 136 ntBASIC2.18□□□□□ -2.06
SNX3O60493 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.18□□□□□ -2.06
SNX3O60493 AC068781.1-201ENST00000488231 618 ntBASIC2.18□□□□□ -2.06
SNX3O60493 AC015911.1-201ENST00000495111 156 ntBASIC2.18□□□□□ -2.06
SNX3O60493 MTCO1P29-201ENST00000496868 288 ntBASIC2.18□□□□□ -2.06
SNX3O60493 SLC25A15P5-201ENST00000508033 253 ntBASIC2.18□□□□□ -2.06
SNX3O60493 RNU4-49P-201ENST00000516080 140 ntBASIC2.18□□□□□ -2.06
SNX3O60493 RN7SKP256-201ENST00000517201 314 ntBASIC2.18□□□□□ -2.06
SNX3O60493 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.18□□□□□ -2.06
SNX3O60493 AC023043.2-201ENST00000589678 1026 ntBASIC2.18□□□□□ -2.06
SNX3O60493 AL034555.1-201ENST00000604816 211 ntBASIC2.18□□□□□ -2.06
SNX3O60493 BNIP3P10-201ENST00000605360 577 ntBASIC2.18□□□□□ -2.06
SNX3O60493 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.18□□□□□ -2.06
SNX3O60493 AC093913.1-201ENST00000614178 329 ntBASIC2.18□□□□□ -2.06
SNX3O60493 AC063943.3-201ENST00000615562 356 ntBASIC2.18□□□□□ -2.06
SNX3O60493 U4atac.1-201ENST00000618345 95 ntBASIC2.18□□□□□ -2.06
SNX3O60493 SNORA43.4-201ENST00000629559 138 ntBASIC2.18□□□□□ -2.06
SNX3O60493 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SNX3O60493 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SNX3O60493 AC009541.1-201ENST00000438279 2662 ntBASIC2.18□□□□□ -2.06
SNX3O60493 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SNX3O60493 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.18□□□□□ -2.06
SNX3O60493 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
SNX3O60493 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
SNX3O60493 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.17□□□□□ -2.06
SNX3O60493 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
SNX3O60493 AP000560.1-201ENST00000624150 1937 ntBASIC2.17□□□□□ -2.06
SNX3O60493 RNU4-15P-201ENST00000362613 141 ntBASIC2.17□□□□□ -2.06
SNX3O60493 RNU6-562P-201ENST00000362731 107 ntBASIC2.17□□□□□ -2.06
SNX3O60493 RNU6-944P-201ENST00000364023 107 ntBASIC2.17□□□□□ -2.06
SNX3O60493 SNORA67.1-201ENST00000364749 141 ntBASIC2.17□□□□□ -2.06
SNX3O60493 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SNX3O60493 SNORD116-11-201ENST00000383882 92 ntBASIC2.17□□□□□ -2.06
SNX3O60493 BTF3L4P2-201ENST00000392798 346 ntBASIC2.17□□□□□ -2.06
SNX3O60493 AL356776.1-201ENST00000406574 447 ntBASIC2.17□□□□□ -2.06
SNX3O60493 AC006946.1-201ENST00000429106 328 ntBASIC2.17□□□□□ -2.06
SNX3O60493 AL645568.3-201ENST00000433683 316 ntBASIC2.17□□□□□ -2.06
SNX3O60493 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.17□□□□□ -2.06
SNX3O60493 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.17□□□□□ -2.06
SNX3O60493 SNORD109B-201ENST00000458961 67 ntBASIC2.17□□□□□ -2.06
SNX3O60493 SNORD109A-201ENST00000459128 67 ntBASIC2.17□□□□□ -2.06
SNX3O60493 AC022447.4-201ENST00000504053 364 ntBASIC2.17□□□□□ -2.06
SNX3O60493 AC018710.1-201ENST00000506509 158 ntBASIC2.17□□□□□ -2.06
SNX3O60493 RNU6-1088P-201ENST00000516850 104 ntBASIC2.17□□□□□ -2.06
SNX3O60493 SNORA70.24-201ENST00000517233 118 ntBASIC2.17□□□□□ -2.06
SNX3O60493 AC007375.1-201ENST00000554513 578 ntBASIC2.17□□□□□ -2.06
SNX3O60493 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.17□□□□□ -2.06
SNX3O60493 CPDP1-201ENST00000579660 283 ntBASIC2.17□□□□□ -2.06
SNX3O60493 MIR3136-201ENST00000583498 78 ntBASIC2.17□□□□□ -2.06
SNX3O60493 AC018889.1-201ENST00000605372 397 ntBASIC2.17□□□□□ -2.06
SNX3O60493 AC009248.2-201ENST00000619826 254 ntBASIC2.17□□□□□ -2.06
SNX3O60493 AL450472.1-202ENST00000637286 180 ntBASIC2.17□□□□□ -2.06
SNX3O60493 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.17□□□□□ -2.06
SNX3O60493 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SNX3O60493 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SNX3O60493 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SNX3O60493 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.16□□□□□ -2.06
SNX3O60493 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.16□□□□□ -2.06
SNX3O60493 Y_RNA.151-201ENST00000363566 112 ntBASIC2.16□□□□□ -2.06
SNX3O60493 SNORA36A-201ENST00000384221 132 ntBASIC2.16□□□□□ -2.06
SNX3O60493 MIR29B2-201ENST00000385055 81 ntBASIC2.16□□□□□ -2.06
SNX3O60493 MIR561-201ENST00000385216 97 ntBASIC2.16□□□□□ -2.06
SNX3O60493 SNORA26.3-201ENST00000391119 136 ntBASIC2.16□□□□□ -2.06
SNX3O60493 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.16□□□□□ -2.06
SNX3O60493 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.16□□□□□ -2.06
SNX3O60493 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.16□□□□□ -2.06
SNX3O60493 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.16□□□□□ -2.06
SNX3O60493 AC018868.1-201ENST00000491307 315 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms