Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC009163.5-201ENST00000575421 637 ntBASIC2.72□□□□□ -1.97
LDB2O43679 AC078899.3-201ENST00000599065 212 ntBASIC2.72□□□□□ -1.97
LDB2O43679 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
LDB2O43679 AC097372.5-201ENST00000623665 376 ntBASIC2.72□□□□□ -1.97
LDB2O43679 MIR3529-201ENST00000637713 78 ntBASIC2.72□□□□□ -1.97
LDB2O43679 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LDB2O43679 HAUS6P2-201ENST00000433254 2404 ntBASIC2.72□□□□□ -1.97
LDB2O43679 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
LDB2O43679 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.71□□□□□ -1.98
LDB2O43679 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
LDB2O43679 Y_RNA.5-201ENST00000362334 102 ntBASIC2.71□□□□□ -1.98
LDB2O43679 MIR887-201ENST00000401258 79 ntBASIC2.71□□□□□ -1.98
LDB2O43679 RNU6-1245P-201ENST00000411130 106 ntBASIC2.71□□□□□ -1.98
LDB2O43679 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.71□□□□□ -1.98
LDB2O43679 AC074117.2-201ENST00000417130 397 ntBASIC2.71□□□□□ -1.98
LDB2O43679 PMCHL1-202ENST00000423102 261 ntBASIC2.71□□□□□ -1.98
LDB2O43679 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LDB2O43679 FO393415.2-201ENST00000480085 343 ntBASIC2.71□□□□□ -1.98
LDB2O43679 AL163540.1-201ENST00000485382 386 ntBASIC2.71□□□□□ -1.98
LDB2O43679 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.71□□□□□ -1.98
LDB2O43679 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.71□□□□□ -1.98
LDB2O43679 RNU6-264P-201ENST00000517134 104 ntBASIC2.71□□□□□ -1.98
LDB2O43679 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.71□□□□□ -1.98
LDB2O43679 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.71□□□□□ -1.98
LDB2O43679 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.71□□□□□ -1.98
LDB2O43679 RPL12P50-201ENST00000603116 116 ntBASIC2.71□□□□□ -1.98
LDB2O43679 AP001836.1-201ENST00000604675 523 ntBASIC2.71□□□□□ -1.98
LDB2O43679 AC024581.2-201ENST00000619986 252 ntBASIC2.71□□□□□ -1.98
LDB2O43679 AC241585.2-209ENST00000638217 143 ntBASIC2.71□□□□□ -1.98
LDB2O43679 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LDB2O43679 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LDB2O43679 AC004944.1-201ENST00000517807 3059 ntBASIC2.71□□□□□ -1.98
LDB2O43679 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.7□□□□□ -1.98
LDB2O43679 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
LDB2O43679 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LDB2O43679 MAPK10-266ENST00000641066 6555 ntBASIC2.7□□□□□ -1.98
LDB2O43679 MTND5P9-201ENST00000503854 1755 ntBASIC2.7□□□□□ -1.98
LDB2O43679 Y_RNA.31-201ENST00000362574 102 ntBASIC2.7□□□□□ -1.98
LDB2O43679 SNORD56.1-201ENST00000362913 68 ntBASIC2.7□□□□□ -1.98
LDB2O43679 Y_RNA.216-201ENST00000364205 93 ntBASIC2.7□□□□□ -1.98
LDB2O43679 Y_RNA.252-201ENST00000364556 101 ntBASIC2.7□□□□□ -1.98
LDB2O43679 RNU6-843P-201ENST00000384454 104 ntBASIC2.7□□□□□ -1.98
LDB2O43679 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LDB2O43679 RNU2-49P-201ENST00000410666 184 ntBASIC2.7□□□□□ -1.98
LDB2O43679 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.7□□□□□ -1.98
LDB2O43679 AC096649.2-201ENST00000416186 393 ntBASIC2.7□□□□□ -1.98
LDB2O43679 AC018865.2-201ENST00000423631 129 ntBASIC2.7□□□□□ -1.98
LDB2O43679 PTGES3P4-201ENST00000426243 356 ntBASIC2.7□□□□□ -1.98
LDB2O43679 AL365496.1-201ENST00000426885 215 ntBASIC2.7□□□□□ -1.98
LDB2O43679 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.7□□□□□ -1.98
LDB2O43679 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LDB2O43679 AC243964.1-201ENST00000441814 261 ntBASIC2.7□□□□□ -1.98
LDB2O43679 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.7□□□□□ -1.98
LDB2O43679 AC068781.1-201ENST00000488231 618 ntBASIC2.7□□□□□ -1.98
LDB2O43679 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.7□□□□□ -1.98
LDB2O43679 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.7□□□□□ -1.98
LDB2O43679 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.7□□□□□ -1.98
LDB2O43679 CBX3P8-201ENST00000532412 525 ntBASIC2.7□□□□□ -1.98
LDB2O43679 AC019159.1-201ENST00000605094 187 ntBASIC2.7□□□□□ -1.98
LDB2O43679 AC009318.2-201ENST00000610917 651 ntBASIC2.7□□□□□ -1.98
LDB2O43679 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.7□□□□□ -1.98
LDB2O43679 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LDB2O43679 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.69□□□□□ -1.98
LDB2O43679 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.69□□□□□ -1.98
LDB2O43679 Y_RNA.28-201ENST00000362554 111 ntBASIC2.69□□□□□ -1.98
LDB2O43679 U8.9-201ENST00000365667 134 ntBASIC2.69□□□□□ -1.98
LDB2O43679 RNU6-784P-201ENST00000384330 106 ntBASIC2.69□□□□□ -1.98
LDB2O43679 RNU6-308P-201ENST00000390957 107 ntBASIC2.69□□□□□ -1.98
LDB2O43679 snosnR66.1-201ENST00000391095 99 ntBASIC2.69□□□□□ -1.98
LDB2O43679 BTF3L4P2-201ENST00000392798 346 ntBASIC2.69□□□□□ -1.98
LDB2O43679 AC104332.2-201ENST00000429959 156 ntBASIC2.69□□□□□ -1.98
LDB2O43679 AC007969.2-201ENST00000441891 191 ntBASIC2.69□□□□□ -1.98
LDB2O43679 AL035666.1-201ENST00000446195 348 ntBASIC2.69□□□□□ -1.98
LDB2O43679 RPL17P19-201ENST00000489069 552 ntBASIC2.69□□□□□ -1.98
LDB2O43679 AC022447.4-201ENST00000504053 364 ntBASIC2.69□□□□□ -1.98
LDB2O43679 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.69□□□□□ -1.98
LDB2O43679 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.69□□□□□ -1.98
LDB2O43679 RNU5F-8P-201ENST00000515941 111 ntBASIC2.69□□□□□ -1.98
LDB2O43679 SNORA31.23-201ENST00000517219 133 ntBASIC2.69□□□□□ -1.98
LDB2O43679 RNU6-988P-201ENST00000519081 107 ntBASIC2.69□□□□□ -1.98
LDB2O43679 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.69□□□□□ -1.98
LDB2O43679 SUB1P3-201ENST00000564581 315 ntBASIC2.69□□□□□ -1.98
LDB2O43679 AC010653.1-201ENST00000571108 881 ntBASIC2.69□□□□□ -1.98
LDB2O43679 MIR4319-201ENST00000577285 85 ntBASIC2.69□□□□□ -1.98
LDB2O43679 MIR5696-201ENST00000578474 85 ntBASIC2.69□□□□□ -1.98
LDB2O43679 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
LDB2O43679 AL158827.2-201ENST00000602494 330 ntBASIC2.69□□□□□ -1.98
LDB2O43679 AC091152.3-201ENST00000604227 325 ntBASIC2.69□□□□□ -1.98
LDB2O43679 AC005014.2-201ENST00000607795 599 ntBASIC2.69□□□□□ -1.98
LDB2O43679 HMGB1P24-202ENST00000615653 685 ntBASIC2.69□□□□□ -1.98
LDB2O43679 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.69□□□□□ -1.98
LDB2O43679 AL691447.3-201ENST00000635020 330 ntBASIC2.69□□□□□ -1.98
LDB2O43679 ZNF299P-201ENST00000406845 1804 ntBASIC2.69□□□□□ -1.98
LDB2O43679 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LDB2O43679 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.68□□□□□ -1.98
LDB2O43679 AC099654.7-201ENST00000635788 2127 ntBASIC2.68□□□□□ -1.98
LDB2O43679 Y_RNA.48-201ENST00000362710 103 ntBASIC2.68□□□□□ -1.98
LDB2O43679 SNORD50.1-201ENST00000362987 71 ntBASIC2.68□□□□□ -1.98
LDB2O43679 Y_RNA.123-201ENST00000363338 102 ntBASIC2.68□□□□□ -1.98
LDB2O43679 Y_RNA.162-201ENST00000363683 102 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms