Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.21□□□□□ -1.9
PRPF3O43395 Y_RNA.632-201ENST00000459189 102 ntBASIC3.21□□□□□ -1.9
PRPF3O43395 AP001486.1-201ENST00000463339 476 ntBASIC3.21□□□□□ -1.9
PRPF3O43395 AL121594.1-201ENST00000475906 575 ntBASIC3.21□□□□□ -1.9
PRPF3O43395 RNA5SP367-201ENST00000516557 118 ntBASIC3.21□□□□□ -1.9
PRPF3O43395 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.21□□□□□ -1.9
PRPF3O43395 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.21□□□□□ -1.9
PRPF3O43395 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.21□□□□□ -1.9
PRPF3O43395 AC079600.2-201ENST00000550076 130 ntBASIC3.21□□□□□ -1.9
PRPF3O43395 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
PRPF3O43395 MIR3605-201ENST00000583214 100 ntBASIC3.21□□□□□ -1.9
PRPF3O43395 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.21□□□□□ -1.9
PRPF3O43395 MIR3976-201ENST00000606807 139 ntBASIC3.21□□□□□ -1.9
PRPF3O43395 AL137790.1-201ENST00000634283 177 ntBASIC3.21□□□□□ -1.9
PRPF3O43395 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.21□□□□□ -1.9
PRPF3O43395 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PRPF3O43395 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
PRPF3O43395 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.2□□□□□ -1.9
PRPF3O43395 SNORA26.7-201ENST00000391288 122 ntBASIC3.2□□□□□ -1.9
PRPF3O43395 MTCYBP4-201ENST00000401524 249 ntBASIC3.2□□□□□ -1.9
PRPF3O43395 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.2□□□□□ -1.9
PRPF3O43395 AL590556.1-201ENST00000423231 483 ntBASIC3.2□□□□□ -1.9
PRPF3O43395 AC092427.1-202ENST00000430569 476 ntBASIC3.2□□□□□ -1.9
PRPF3O43395 AL513124.1-201ENST00000450410 614 ntBASIC3.2□□□□□ -1.9
PRPF3O43395 AC026782.1-201ENST00000512952 449 ntBASIC3.2□□□□□ -1.9
PRPF3O43395 RNA5SP76-201ENST00000516277 87 ntBASIC3.2□□□□□ -1.9
PRPF3O43395 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.2□□□□□ -1.9
PRPF3O43395 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PRPF3O43395 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.2□□□□□ -1.9
PRPF3O43395 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.2□□□□□ -1.9
PRPF3O43395 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.2□□□□□ -1.9
PRPF3O43395 MIR5571-201ENST00000577998 113 ntBASIC3.2□□□□□ -1.9
PRPF3O43395 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.2□□□□□ -1.9
PRPF3O43395 MIR4273-201ENST00000582824 84 ntBASIC3.2□□□□□ -1.9
PRPF3O43395 AC060766.3-201ENST00000591442 263 ntBASIC3.2□□□□□ -1.9
PRPF3O43395 AL033523.1-201ENST00000605153 153 ntBASIC3.2□□□□□ -1.9
PRPF3O43395 MIR6852-201ENST00000621699 66 ntBASIC3.2□□□□□ -1.9
PRPF3O43395 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PRPF3O43395 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.19□□□□□ -1.9
PRPF3O43395 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PRPF3O43395 RNU1-112P-201ENST00000364401 164 ntBASIC3.19□□□□□ -1.9
PRPF3O43395 U8.9-201ENST00000365667 134 ntBASIC3.19□□□□□ -1.9
PRPF3O43395 AL590004.2-201ENST00000404787 371 ntBASIC3.19□□□□□ -1.9
PRPF3O43395 RNU6-174P-201ENST00000410406 106 ntBASIC3.19□□□□□ -1.9
PRPF3O43395 RNU6-1328P-201ENST00000410938 106 ntBASIC3.19□□□□□ -1.9
PRPF3O43395 AL139281.1-201ENST00000422120 335 ntBASIC3.19□□□□□ -1.9
PRPF3O43395 AIMP1P2-201ENST00000425294 312 ntBASIC3.19□□□□□ -1.9
PRPF3O43395 Z82205.1-201ENST00000428456 297 ntBASIC3.19□□□□□ -1.9
PRPF3O43395 RPL30P4-201ENST00000429309 333 ntBASIC3.19□□□□□ -1.9
PRPF3O43395 USP9YP30-201ENST00000430729 455 ntBASIC3.19□□□□□ -1.9
PRPF3O43395 AC087499.2-201ENST00000432861 149 ntBASIC3.19□□□□□ -1.9
PRPF3O43395 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.19□□□□□ -1.9
PRPF3O43395 GPM6BP3-201ENST00000442797 145 ntBASIC3.19□□□□□ -1.9
PRPF3O43395 RPS3P1-201ENST00000456781 192 ntBASIC3.19□□□□□ -1.9
PRPF3O43395 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.19□□□□□ -1.9
PRPF3O43395 SNORA9.3-201ENST00000516383 129 ntBASIC3.19□□□□□ -1.9
PRPF3O43395 SNORA31.26-201ENST00000517250 137 ntBASIC3.19□□□□□ -1.9
PRPF3O43395 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.19□□□□□ -1.9
PRPF3O43395 APOOP3-201ENST00000536787 586 ntBASIC3.19□□□□□ -1.9
PRPF3O43395 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.19□□□□□ -1.9
PRPF3O43395 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.19□□□□□ -1.9
PRPF3O43395 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PRPF3O43395 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PRPF3O43395 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.19□□□□□ -1.9
PRPF3O43395 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PRPF3O43395 RNU6-1180P-201ENST00000364935 107 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 SET-203ENST00000372688 801 ntTSL 2 BASIC3.18□□□□□ -1.9
PRPF3O43395 RNU6-1286P-201ENST00000383871 107 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 Y_RNA.473-201ENST00000384333 102 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 Y_RNA.535-201ENST00000384612 99 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 AL138827.1-201ENST00000402666 306 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 Y_RNA.594-201ENST00000410373 140 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 RNU6-1050P-201ENST00000410388 107 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 RNU2-63P-201ENST00000410792 194 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 RNU6-1304P-201ENST00000411374 106 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.18□□□□□ -1.9
PRPF3O43395 MTCO2P27-201ENST00000420740 428 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 AC112220.1-201ENST00000434628 355 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.18□□□□□ -1.9
PRPF3O43395 AL445687.1-201ENST00000439946 251 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 FTH1P25-201ENST00000447665 469 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 GSTA11P-201ENST00000452866 669 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.18□□□□□ -1.9
PRPF3O43395 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.18□□□□□ -1.9
PRPF3O43395 UBE2DNL-203ENST00000474922 222 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 HMGB1P35-201ENST00000503360 598 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.18□□□□□ -1.9
PRPF3O43395 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.18□□□□□ -1.9
PRPF3O43395 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.18□□□□□ -1.9
PRPF3O43395 MIR3117-201ENST00000584034 78 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 RPL30P11-203ENST00000598995 310 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 MTND4LP32-201ENST00000636111 270 ntBASIC3.18□□□□□ -1.9
PRPF3O43395 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PRPF3O43395 MTND5P9-201ENST00000503854 1755 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRPF3O43395 KPNA2P1-201ENST00000458289 1591 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 AC073544.1-201ENST00000600110 1595 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRPF3O43395 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.17□□□□□ -1.9
PRPF3O43395 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms