Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC087477.1-201ENST00000465747 340 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 RPL30P10-201ENST00000488148 337 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 HMGB1P35-201ENST00000503360 598 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 AC021146.2-201ENST00000504736 556 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 COX6CP5-201ENST00000527162 228 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.03□□□□□ -1.92
PHGDHO43175 SNRPGP18-201ENST00000553000 214 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 AL034555.1-201ENST00000604816 211 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 MIR7975-201ENST00000619350 68 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 AC018692.3-201ENST00000623929 123 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 MIR7157-201ENST00000635801 60 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 AL450472.1-202ENST00000637286 180 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PHGDHO43175 AC108206.1-201ENST00000570186 4159 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PHGDHO43175 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PHGDHO43175 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PHGDHO43175 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PHGDHO43175 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 RNA5SP274-201ENST00000410484 108 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 MTCYBP10-201ENST00000424905 650 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 AC092423.1-201ENST00000430165 186 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 MTCO3P29-201ENST00000432119 779 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 Z82188.1-201ENST00000436709 154 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 AL137792.2-201ENST00000443484 235 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 AC073901.1-201ENST00000462471 408 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 RPL7P49-201ENST00000471402 708 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 AC109925.1-201ENST00000478069 331 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 RN7SL633P-201ENST00000488974 297 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 AF186996.7-201ENST00000492781 209 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 RNU7-175P-201ENST00000515915 61 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 RN7SKP43-201ENST00000516173 320 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 RNU6-567P-201ENST00000516746 107 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 SCARNA3-201ENST00000517097 143 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.02□□□□□ -1.93
PHGDHO43175 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.02□□□□□ -1.93
PHGDHO43175 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.02□□□□□ -1.93
PHGDHO43175 AC074050.1-201ENST00000563247 211 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 AC004584.2-201ENST00000570407 410 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 MIR5701-3-201ENST00000578890 82 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 MIR5701-1-201ENST00000585138 82 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 Z98751.3-201ENST00000604447 521 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 RPL23AP88-201ENST00000605759 454 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 Y_RNA.812-201ENST00000610788 101 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 Y_RNA.784-201ENST00000613803 101 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 MIR5701-2-201ENST00000615634 82 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 Y_RNA.787-201ENST00000616522 101 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 Y_RNA.780-201ENST00000617336 101 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 Y_RNA.801-201ENST00000619005 101 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 AC007318.2-201ENST00000620999 243 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.02□□□□□ -1.93
PHGDHO43175 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.02□□□□□ -1.93
PHGDHO43175 AC092435.3-201ENST00000565538 3654 ntBASIC3.02□□□□□ -1.93
PHGDHO43175 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.02□□□□□ -1.93
PHGDHO43175 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
PHGDHO43175 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PHGDHO43175 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.01□□□□□ -1.93
PHGDHO43175 SNORA63.1-201ENST00000362493 131 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 Y_RNA.428-201ENST00000384078 102 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 Y_RNA.577-201ENST00000384794 101 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 SNORA12.2-201ENST00000391040 156 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 AL590004.1-201ENST00000405321 300 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 RNA5SP344-201ENST00000411081 104 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 AL513477.1-202ENST00000417061 214 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 AC007098.1-201ENST00000420122 367 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 MRPS18CP6-201ENST00000423587 223 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 AC005326.1-201ENST00000429197 123 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 RPL30P4-201ENST00000429309 333 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 MICF-203ENST00000432679 129 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.01□□□□□ -1.93
PHGDHO43175 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.01□□□□□ -1.93
PHGDHO43175 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.01□□□□□ -1.93
PHGDHO43175 snoU13.30-201ENST00000458951 104 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 AL163540.1-201ENST00000485382 386 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 AC140059.1-201ENST00000489238 361 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 AC105758.1-201ENST00000506038 399 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 RN7SKP272-201ENST00000516988 232 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 Y_RNA.711-201ENST00000516993 102 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 SNORD116.3-201ENST00000517176 78 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PHGDHO43175 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.01□□□□□ -1.93
PHGDHO43175 AC027176.1-201ENST00000560204 514 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 AC010928.2-201ENST00000588017 287 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 RPL30P11-203ENST00000598995 310 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.01□□□□□ -1.93
PHGDHO43175 AL078605.1-201ENST00000603529 500 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 AC080128.1-201ENST00000474389 1917 ntBASIC3.01□□□□□ -1.93
PHGDHO43175 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PHGDHO43175 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
PHGDHO43175 MTND4P27-201ENST00000450813 1354 ntBASIC3□□□□□ -1.93
PHGDHO43175 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PHGDHO43175 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PHGDHO43175 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3□□□□□ -1.93
PHGDHO43175 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3□□□□□ -1.93
PHGDHO43175 RNU5B-2P-201ENST00000363036 113 ntBASIC3□□□□□ -1.93
PHGDHO43175 Y_RNA.112-201ENST00000363250 102 ntBASIC3□□□□□ -1.93
PHGDHO43175 SNORA22B-201ENST00000383876 138 ntBASIC3□□□□□ -1.93
PHGDHO43175 Y_RNA.405-201ENST00000383979 100 ntBASIC3□□□□□ -1.93
PHGDHO43175 Y_RNA.451-201ENST00000384200 100 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms