Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MIR6766-201ENST00000622641 72 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.61□□□□□ -1.99
ATP2A1O14983 AC244517.12-201ENST00000623581 663 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 MIR7157-201ENST00000635801 60 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ATP2A1O14983 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
ATP2A1O14983 SNORD114-1-201ENST00000362705 72 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 RNU6-1010P-201ENST00000362757 107 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 RNU6-486P-201ENST00000363116 107 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 Y_RNA.212-201ENST00000364177 102 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 RNU1-91P-201ENST00000364746 163 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ATP2A1O14983 RNU6-767P-201ENST00000384132 107 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 RNU6-1245P-201ENST00000411130 106 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.6□□□□□ -1.99
ATP2A1O14983 AC138393.2-201ENST00000414742 246 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 MTND4LP16-201ENST00000440828 295 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 RNU6-1037P-201ENST00000459571 107 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 RNU6-329P-201ENST00000459618 107 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 AC107222.1-201ENST00000510899 637 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 AC046134.1-201ENST00000514454 666 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 HSPE1P18-201ENST00000517602 280 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.6□□□□□ -1.99
ATP2A1O14983 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.6□□□□□ -1.99
ATP2A1O14983 AC026371.1-201ENST00000551867 419 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 MIR3672-201ENST00000584290 82 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 AL022345.1-201ENST00000607292 135 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 MIR7843-201ENST00000622274 79 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.6□□□□□ -1.99
ATP2A1O14983 AC097372.5-201ENST00000623665 376 ntBASIC2.6□□□□□ -1.99
ATP2A1O14983 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.6□□□□□ -1.99
ATP2A1O14983 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ATP2A1O14983 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ATP2A1O14983 CBX3P1-201ENST00000325243 554 ntBASIC2.59□□□□□ -1.99
ATP2A1O14983 U8.8-201ENST00000365399 135 ntBASIC2.59□□□□□ -1.99
ATP2A1O14983 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ATP2A1O14983 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ATP2A1O14983 RNU6-293P-201ENST00000411259 106 ntBASIC2.59□□□□□ -1.99
ATP2A1O14983 MTND3P8-201ENST00000412909 339 ntBASIC2.59□□□□□ -1.99
ATP2A1O14983 AC138623.1-201ENST00000418060 216 ntBASIC2.59□□□□□ -1.99
ATP2A1O14983 SUMO1P4-201ENST00000429430 302 ntBASIC2.59□□□□□ -1.99
ATP2A1O14983 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.59□□□□□ -1.99
ATP2A1O14983 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ATP2A1O14983 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.59□□□□□ -1.99
ATP2A1O14983 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.59□□□□□ -1.99
ATP2A1O14983 MTND3P10-201ENST00000450967 341 ntBASIC2.59□□□□□ -1.99
ATP2A1O14983 AC109329.1-201ENST00000518744 317 ntBASIC2.59□□□□□ -1.99
ATP2A1O14983 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.59□□□□□ -1.99
ATP2A1O14983 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.59□□□□□ -1.99
ATP2A1O14983 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.59□□□□□ -1.99
ATP2A1O14983 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.59□□□□□ -1.99
ATP2A1O14983 MIR4446-201ENST00000578505 67 ntBASIC2.59□□□□□ -1.99
ATP2A1O14983 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.59□□□□□ -1.99
ATP2A1O14983 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
ATP2A1O14983 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.59□□□□□ -2
ATP2A1O14983 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.59□□□□□ -2
ATP2A1O14983 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ATP2A1O14983 AC002543.1-201ENST00000299783 1954 ntBASIC2.58□□□□□ -2
ATP2A1O14983 RNU6-562P-201ENST00000362731 107 ntBASIC2.58□□□□□ -2
ATP2A1O14983 Y_RNA.88-201ENST00000363029 99 ntBASIC2.58□□□□□ -2
ATP2A1O14983 SNORD114-19-201ENST00000363072 75 ntBASIC2.58□□□□□ -2
ATP2A1O14983 Y_RNA.166-201ENST00000363730 102 ntBASIC2.58□□□□□ -2
ATP2A1O14983 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.58□□□□□ -2
ATP2A1O14983 AC097463.2-201ENST00000421074 142 ntBASIC2.58□□□□□ -2
ATP2A1O14983 AL645568.3-201ENST00000433683 316 ntBASIC2.58□□□□□ -2
ATP2A1O14983 AC243964.1-201ENST00000441814 261 ntBASIC2.58□□□□□ -2
ATP2A1O14983 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.58□□□□□ -2
ATP2A1O14983 PMCHL2-203ENST00000457791 237 ntBASIC2.58□□□□□ -2
ATP2A1O14983 AC112771.1-201ENST00000463581 102 ntBASIC2.58□□□□□ -2
ATP2A1O14983 AC090096.1-201ENST00000489168 390 ntBASIC2.58□□□□□ -2
ATP2A1O14983 AC008526.1-201ENST00000509149 338 ntBASIC2.58□□□□□ -2
ATP2A1O14983 SNORA31.15-201ENST00000516771 132 ntBASIC2.58□□□□□ -2
ATP2A1O14983 SNORA31.18-201ENST00000517043 134 ntBASIC2.58□□□□□ -2
ATP2A1O14983 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.58□□□□□ -2
ATP2A1O14983 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.58□□□□□ -2
ATP2A1O14983 TRAV32-201ENST00000553993 340 ntBASIC2.58□□□□□ -2
ATP2A1O14983 MIR4742-201ENST00000581069 85 ntBASIC2.58□□□□□ -2
ATP2A1O14983 MIR3616-201ENST00000584070 92 ntBASIC2.58□□□□□ -2
ATP2A1O14983 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.58□□□□□ -2
ATP2A1O14983 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.58□□□□□ -2
ATP2A1O14983 AC080128.1-201ENST00000474389 1917 ntBASIC2.58□□□□□ -2
ATP2A1O14983 Z75746.1-201ENST00000440243 2080 ntBASIC2.57□□□□□ -2
ATP2A1O14983 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
ATP2A1O14983 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.57□□□□□ -2
ATP2A1O14983 OR56A5-201ENST00000340110 738 ntBASIC2.57□□□□□ -2
ATP2A1O14983 Y_RNA.301-201ENST00000364990 103 ntBASIC2.57□□□□□ -2
ATP2A1O14983 SNORD116-11-201ENST00000383882 92 ntBASIC2.57□□□□□ -2
ATP2A1O14983 MIR221-201ENST00000385135 110 ntBASIC2.57□□□□□ -2
ATP2A1O14983 RN7SKP32-201ENST00000410167 303 ntBASIC2.57□□□□□ -2
ATP2A1O14983 RNU2-23P-201ENST00000410545 195 ntBASIC2.57□□□□□ -2
ATP2A1O14983 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.57□□□□□ -2
ATP2A1O14983 SNAP23P1-201ENST00000433229 246 ntBASIC2.57□□□□□ -2
ATP2A1O14983 AC096745.1-201ENST00000509945 370 ntBASIC2.57□□□□□ -2
ATP2A1O14983 RNU6-237P-201ENST00000515985 71 ntBASIC2.57□□□□□ -2
ATP2A1O14983 RNA5SP200-201ENST00000516360 103 ntBASIC2.57□□□□□ -2
ATP2A1O14983 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.57□□□□□ -2
ATP2A1O14983 SCOCP1-201ENST00000554676 349 ntBASIC2.57□□□□□ -2
ATP2A1O14983 MIR4658-201ENST00000584344 65 ntBASIC2.57□□□□□ -2
ATP2A1O14983 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms