Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.07□□□□□ -2.08
CDX4O14627 RMST_4.1-201ENST00000616886 107 ntBASIC2.07□□□□□ -2.08
CDX4O14627 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.07□□□□□ -2.08
CDX4O14627 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CDX4O14627 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CDX4O14627 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CDX4O14627 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CDX4O14627 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.06□□□□□ -2.08
CDX4O14627 SNORD3E-201ENST00000362899 217 ntBASIC2.06□□□□□ -2.08
CDX4O14627 RNU6-797P-201ENST00000363101 109 ntBASIC2.06□□□□□ -2.08
CDX4O14627 RNU6-1303P-201ENST00000364841 107 ntBASIC2.06□□□□□ -2.08
CDX4O14627 Y_RNA.356-201ENST00000365475 113 ntBASIC2.06□□□□□ -2.08
CDX4O14627 RNU6-72P-201ENST00000384285 79 ntBASIC2.06□□□□□ -2.08
CDX4O14627 Y_RNA.529-201ENST00000384586 119 ntBASIC2.06□□□□□ -2.08
CDX4O14627 RNU6-510P-201ENST00000391239 108 ntBASIC2.06□□□□□ -2.08
CDX4O14627 RNU2-41P-201ENST00000410991 178 ntBASIC2.06□□□□□ -2.08
CDX4O14627 ARL5AP1-201ENST00000418991 388 ntBASIC2.06□□□□□ -2.08
CDX4O14627 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.06□□□□□ -2.08
CDX4O14627 MTCO3P46-201ENST00000425787 232 ntBASIC2.06□□□□□ -2.08
CDX4O14627 AC093019.1-201ENST00000443135 252 ntBASIC2.06□□□□□ -2.08
CDX4O14627 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.06□□□□□ -2.08
CDX4O14627 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.06□□□□□ -2.08
CDX4O14627 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.06□□□□□ -2.08
CDX4O14627 MTND1P11-201ENST00000456661 876 ntBASIC2.06□□□□□ -2.08
CDX4O14627 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.06□□□□□ -2.08
CDX4O14627 RNU6-329P-201ENST00000459618 107 ntBASIC2.06□□□□□ -2.08
CDX4O14627 DYNLL1P5-201ENST00000467158 270 ntBASIC2.06□□□□□ -2.08
CDX4O14627 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.06□□□□□ -2.08
CDX4O14627 AC103851.1-201ENST00000506833 274 ntBASIC2.06□□□□□ -2.08
CDX4O14627 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.06□□□□□ -2.08
CDX4O14627 RNA5SP112-201ENST00000515937 99 ntBASIC2.06□□□□□ -2.08
CDX4O14627 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.06□□□□□ -2.08
CDX4O14627 AC087241.2-201ENST00000535801 324 ntBASIC2.06□□□□□ -2.08
CDX4O14627 AP000763.2-201ENST00000540641 163 ntBASIC2.06□□□□□ -2.08
CDX4O14627 MIR4742-201ENST00000581069 85 ntBASIC2.06□□□□□ -2.08
CDX4O14627 AC073539.2-201ENST00000597113 165 ntBASIC2.06□□□□□ -2.08
CDX4O14627 VN1R80P-201ENST00000597126 338 ntBASIC2.06□□□□□ -2.08
CDX4O14627 AL117336.2-201ENST00000602435 335 ntBASIC2.06□□□□□ -2.08
CDX4O14627 AL670379.10-201ENST00000604330 253 ntBASIC2.06□□□□□ -2.08
CDX4O14627 AL670379.9-201ENST00000605428 253 ntBASIC2.06□□□□□ -2.08
CDX4O14627 snoU13.31-201ENST00000607291 104 ntBASIC2.06□□□□□ -2.08
CDX4O14627 AL359314.1-201ENST00000616913 261 ntBASIC2.06□□□□□ -2.08
CDX4O14627 AL449363.1-201ENST00000617815 186 ntBASIC2.06□□□□□ -2.08
CDX4O14627 AL133216.2-202ENST00000634512 349 ntBASIC2.06□□□□□ -2.08
CDX4O14627 FO624990.1-201ENST00000636373 85 ntBASIC2.06□□□□□ -2.08
CDX4O14627 AC099654.5-201ENST00000636479 350 ntBASIC2.06□□□□□ -2.08
CDX4O14627 AC112487.2-201ENST00000637950 304 ntBASIC2.06□□□□□ -2.08
CDX4O14627 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CDX4O14627 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CDX4O14627 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.06□□□□□ -2.08
CDX4O14627 AL359854.1-201ENST00000614203 1594 ntBASIC2.06□□□□□ -2.08
CDX4O14627 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CDX4O14627 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CDX4O14627 RNU6-858P-201ENST00000362436 107 ntBASIC2.05□□□□□ -2.08
CDX4O14627 Y_RNA.100-201ENST00000363141 102 ntBASIC2.05□□□□□ -2.08
CDX4O14627 RNA5SP393-201ENST00000363423 117 ntBASIC2.05□□□□□ -2.08
CDX4O14627 RNU6-82P-201ENST00000363970 107 ntBASIC2.05□□□□□ -2.08
CDX4O14627 Y_RNA.263-201ENST00000364659 114 ntBASIC2.05□□□□□ -2.08
CDX4O14627 Y_RNA.480-201ENST00000384364 102 ntBASIC2.05□□□□□ -2.08
CDX4O14627 AL356432.1-201ENST00000405809 419 ntBASIC2.05□□□□□ -2.08
CDX4O14627 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.05□□□□□ -2.08
CDX4O14627 RNU6-607P-201ENST00000411283 108 ntBASIC2.05□□□□□ -2.08
CDX4O14627 MTND3P8-201ENST00000412909 339 ntBASIC2.05□□□□□ -2.08
CDX4O14627 AC016831.2-201ENST00000417179 352 ntBASIC2.05□□□□□ -2.08
CDX4O14627 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.05□□□□□ -2.08
CDX4O14627 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.05□□□□□ -2.08
CDX4O14627 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.05□□□□□ -2.08
CDX4O14627 RNU7-66P-201ENST00000459469 62 ntBASIC2.05□□□□□ -2.08
CDX4O14627 AC011005.2-201ENST00000487324 359 ntBASIC2.05□□□□□ -2.08
CDX4O14627 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CDX4O14627 MTND3P25-201ENST00000509243 135 ntBASIC2.05□□□□□ -2.08
CDX4O14627 RNA5SP182-201ENST00000516064 82 ntBASIC2.05□□□□□ -2.08
CDX4O14627 RNU6-189P-201ENST00000516120 101 ntBASIC2.05□□□□□ -2.08
CDX4O14627 RNU6-273P-201ENST00000516937 96 ntBASIC2.05□□□□□ -2.08
CDX4O14627 RN7SKP256-201ENST00000517201 314 ntBASIC2.05□□□□□ -2.08
CDX4O14627 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.05□□□□□ -2.08
CDX4O14627 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.05□□□□□ -2.08
CDX4O14627 AC004486.1-201ENST00000546846 233 ntBASIC2.05□□□□□ -2.08
CDX4O14627 AC090115.3-201ENST00000553218 849 ntBASIC2.05□□□□□ -2.08
CDX4O14627 RPS3AP23-202ENST00000574601 686 ntBASIC2.05□□□□□ -2.08
CDX4O14627 LRRC37A5P-203ENST00000580181 585 ntBASIC2.05□□□□□ -2.08
CDX4O14627 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.05□□□□□ -2.08
CDX4O14627 MIR4765-201ENST00000585007 77 ntBASIC2.05□□□□□ -2.08
CDX4O14627 MIR3942-201ENST00000585264 109 ntBASIC2.05□□□□□ -2.08
CDX4O14627 C8orf59P2-201ENST00000603441 271 ntBASIC2.05□□□□□ -2.08
CDX4O14627 AC096772.1-201ENST00000609146 564 ntBASIC2.05□□□□□ -2.08
CDX4O14627 AL121757.2-201ENST00000611223 313 ntBASIC2.05□□□□□ -2.08
CDX4O14627 U2.17-201ENST00000611454 95 ntBASIC2.05□□□□□ -2.08
CDX4O14627 HMGB1P24-202ENST00000615653 685 ntBASIC2.05□□□□□ -2.08
CDX4O14627 AC103705.1-201ENST00000619013 241 ntBASIC2.05□□□□□ -2.08
CDX4O14627 AC010297.1-201ENST00000623948 149 ntBASIC2.05□□□□□ -2.08
CDX4O14627 AC022418.1-201ENST00000624118 445 ntBASIC2.05□□□□□ -2.08
CDX4O14627 MIR3529-201ENST00000637713 78 ntBASIC2.05□□□□□ -2.08
CDX4O14627 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CDX4O14627 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.05□□□□□ -2.08
CDX4O14627 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CDX4O14627 RNU6-486P-201ENST00000363116 107 ntBASIC2.04□□□□□ -2.08
CDX4O14627 Y_RNA.184-201ENST00000363884 108 ntBASIC2.04□□□□□ -2.08
CDX4O14627 SNORA25.6-201ENST00000364121 118 ntBASIC2.04□□□□□ -2.08
CDX4O14627 Y_RNA.399-201ENST00000383955 105 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms