Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM38O00635 RNU6-475P-201ENST00000516073 104 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 RNU6-1332P-201ENST00000516666 104 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 ACA59.2-201ENST00000517061 156 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 RNU1-54P-201ENST00000517181 120 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM38O00635 AC011494.1-201ENST00000596454 237 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 AC024153.1-201ENST00000603103 365 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM38O00635 UCA1.1-201ENST00000620952 75 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 AL606534.2-204ENST00000635008 178 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM38O00635 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM38O00635 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM38O00635 RNU1-70P-201ENST00000362618 164 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 RNU6-942P-201ENST00000363002 107 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 RNU6-1059P-201ENST00000363752 98 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 RNU5E-7P-201ENST00000365290 117 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 Y_RNA.380-201ENST00000365663 111 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 DYNLT3P1-201ENST00000378574 347 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 Y_RNA.477-201ENST00000384352 108 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 Y_RNA.500-201ENST00000384466 111 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 RNU6-95P-201ENST00000384697 107 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 AL512633.1-201ENST00000399931 655 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 AL138885.1-201ENST00000405921 675 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 MIR1289-1-201ENST00000408836 144 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 USMG5P1-201ENST00000425964 177 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 AL353705.1-201ENST00000433468 480 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 CHEK2P4-201ENST00000450340 246 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM38O00635 AL441985.1-201ENST00000457727 251 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 SNORD5.1-201ENST00000458800 75 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 UBE2DNL-203ENST00000474922 222 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 MRPL42P6-201ENST00000486397 371 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.18□□□□□ -1.9
TRIM38O00635 RNU6-581P-201ENST00000516214 105 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 AC022616.4-201ENST00000522985 181 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.18□□□□□ -1.9
TRIM38O00635 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.18□□□□□ -1.9
TRIM38O00635 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM38O00635 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM38O00635 AL033523.1-201ENST00000605153 153 ntBASIC3.18□□□□□ -1.9
TRIM38O00635 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM38O00635 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM38O00635 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
TRIM38O00635 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
TRIM38O00635 AC093831.2-201ENST00000624393 3427 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM38O00635 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TRIM38O00635 RNU6-487P-201ENST00000365430 104 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 RNU6-33P-201ENST00000384793 107 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 MTCO2P33-201ENST00000402100 465 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 MIR1252-201ENST00000408861 65 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 MTATP6P29-201ENST00000415057 132 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM38O00635 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM38O00635 snoU109.2-201ENST00000459316 135 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 RN7SL75P-201ENST00000461926 281 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 AC107626.1-201ENST00000471084 183 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 AC022447.4-201ENST00000504053 364 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 RNU6-138P-201ENST00000515952 107 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 RNU6-789P-201ENST00000517105 102 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 AC022080.3-201ENST00000544433 482 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 CR383656.8-201ENST00000549046 145 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.17□□□□□ -1.9
TRIM38O00635 AC009163.5-201ENST00000575421 637 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 AC008739.2-201ENST00000597006 317 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 RNU6-91P-201ENST00000607774 107 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 AC098479.1-201ENST00000609225 154 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 AC018692.3-201ENST00000623929 123 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM38O00635 MIR3529-201ENST00000637713 78 ntBASIC3.17□□□□□ -1.9
TRIM38O00635 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM38O00635 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM38O00635 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM38O00635 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM38O00635 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM38O00635 Y_RNA.14-201ENST00000362415 103 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 RNU6-78P-201ENST00000362897 107 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 RNU6-770P-201ENST00000363929 105 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 RNU6-806P-201ENST00000365147 105 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 RNU6-842P-201ENST00000384269 107 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 SNORA44-201ENST00000384584 132 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 Y_RNA.562-201ENST00000384695 113 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 RNU6-713P-201ENST00000384761 107 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 FTH1P15-201ENST00000406984 280 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM38O00635 AC011816.1-201ENST00000441346 546 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM38O00635 MED28P2-201ENST00000475771 317 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 RPL31P41-201ENST00000477967 372 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 AC025465.3-201ENST00000510570 311 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 RNU6-1023P-201ENST00000516137 106 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 SNORA43.2-201ENST00000516652 128 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 Y_RNA.715-201ENST00000517082 110 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 SCARNA11.3-201ENST00000517276 130 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.16□□□□□ -1.9
TRIM38O00635 HSBP1P1-201ENST00000555205 166 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms