Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC027124.2-201ENST00000428249 105 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 TIMM9P3-201ENST00000428659 274 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.95□□□□□ -2.1
SLC28A1O00337 MTCO2P3-201ENST00000442543 421 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 GPM6BP3-201ENST00000442797 145 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 Y_RNA.654-201ENST00000497848 106 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.95□□□□□ -2.1
SLC28A1O00337 AC091885.1-201ENST00000506658 268 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 Y_RNA.693-201ENST00000516641 110 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 RNU6-835P-201ENST00000516974 104 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 IGKV3-31-201ENST00000523109 329 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.95□□□□□ -2.1
SLC28A1O00337 AC007375.1-201ENST00000554513 578 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 AL118558.2-201ENST00000556294 238 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 MIR4287-201ENST00000579398 78 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.95□□□□□ -2.1
SLC28A1O00337 AP001836.1-201ENST00000604675 523 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 AP000654.2-201ENST00000605633 586 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 AC103591.3-201ENST00000608684 209 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 AC098657.3-201ENST00000620434 263 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
SLC28A1O00337 KPNA2P1-201ENST00000458289 1591 ntBASIC1.94□□□□□ -2.1
SLC28A1O00337 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.94□□□□□ -2.1
SLC28A1O00337 RNU4-20P-201ENST00000365601 151 ntBASIC1.94□□□□□ -2.1
SLC28A1O00337 Y_RNA.378-201ENST00000365652 113 ntBASIC1.94□□□□□ -2.1
SLC28A1O00337 SNORA46.1-201ENST00000391069 153 ntBASIC1.94□□□□□ -2.1
SLC28A1O00337 RNU2-40P-201ENST00000410833 196 ntBASIC1.94□□□□□ -2.1
SLC28A1O00337 ARL5AP1-201ENST00000418991 388 ntBASIC1.94□□□□□ -2.1
SLC28A1O00337 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.94□□□□□ -2.1
SLC28A1O00337 AL133396.1-201ENST00000432048 687 ntBASIC1.94□□□□□ -2.1
SLC28A1O00337 AC010486.1-201ENST00000511793 424 ntBASIC1.94□□□□□ -2.1
SLC28A1O00337 RNA5SP364-201ENST00000516938 78 ntBASIC1.94□□□□□ -2.1
SLC28A1O00337 AC087854.1-201ENST00000519706 414 ntBASIC1.94□□□□□ -2.1
SLC28A1O00337 RNU6-323P-201ENST00000521915 107 ntBASIC1.94□□□□□ -2.1
SLC28A1O00337 AL512360.1-201ENST00000555346 234 ntBASIC1.94□□□□□ -2.1
SLC28A1O00337 AL359314.1-201ENST00000616913 261 ntBASIC1.94□□□□□ -2.1
SLC28A1O00337 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
SLC28A1O00337 MIR1248-201ENST00000629190 106 ntBASIC1.94□□□□□ -2.1
SLC28A1O00337 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SLC28A1O00337 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
SLC28A1O00337 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
SLC28A1O00337 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.93□□□□□ -2.1
SLC28A1O00337 AL359851.1-201ENST00000569460 4997 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 ZNF702P-202ENST00000434269 1966 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 SNORD32B-201ENST00000364460 84 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 RNU4-24P-201ENST00000364565 139 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 Y_RNA.504-201ENST00000384481 104 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 SNORA26.3-201ENST00000391119 136 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 SNORA12-201ENST00000391162 147 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 AL512604.1-201ENST00000404812 257 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 RNU6-648P-201ENST00000410190 107 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 RN7SKP284-201ENST00000411002 343 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 AP000275.1-201ENST00000411943 390 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.93□□□□□ -2.1
SLC28A1O00337 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.93□□□□□ -2.1
SLC28A1O00337 RPS27P21-201ENST00000486977 252 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 AC093259.1-201ENST00000509755 300 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.93□□□□□ -2.1
SLC28A1O00337 RNU6-991P-201ENST00000516168 107 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 RNU6-1069P-201ENST00000516612 133 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 MIR514B-201ENST00000516774 80 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 AL512310.1-201ENST00000548639 172 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.93□□□□□ -2.1
SLC28A1O00337 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.93□□□□□ -2.1
SLC28A1O00337 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.93□□□□□ -2.1
SLC28A1O00337 MIR4435-1-201ENST00000582552 80 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 MIR4672-201ENST00000583126 81 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 MIR3935-201ENST00000583472 104 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 AC080013.6-201ENST00000606185 215 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 AL357078.3-201ENST00000607528 618 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 SDR42E1P4-201ENST00000620894 481 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.93□□□□□ -2.1
SLC28A1O00337 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.92□□□□□ -2.1
SLC28A1O00337 CENPCP1-201ENST00000533085 2578 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 RNU4-82P-201ENST00000362443 140 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 RNA5SP276-201ENST00000362580 94 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 MTCYBP2-201ENST00000407745 171 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 AL357139.1-201ENST00000407792 426 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 AL139156.1-201ENST00000412785 841 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 AL356379.1-201ENST00000414105 126 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.92□□□□□ -2.1
SLC28A1O00337 AC096920.1-201ENST00000423991 241 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 MTND1P1-201ENST00000445453 368 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 MTND3P16-201ENST00000452205 344 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 RNU6-1037P-201ENST00000459571 107 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 RNU6-1208P-201ENST00000459588 107 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 AC132942.1-201ENST00000486753 483 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 ANXA2P1-201ENST00000505539 926 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 AC091874.1-201ENST00000511402 339 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.92□□□□□ -2.1
SLC28A1O00337 SNORA19.2-201ENST00000516013 114 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.92□□□□□ -2.1
SLC28A1O00337 AC025423.5-201ENST00000550230 219 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 AC027807.1-201ENST00000559921 996 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 MIR3923-201ENST00000579521 83 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 AC092807.2-201ENST00000609367 243 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
SLC28A1O00337 MIR219B-201ENST00000637023 88 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 AC008555.8-201ENST00000623602 2168 ntBASIC1.92□□□□□ -2.1
SLC28A1O00337 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms