Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
EIF3FO00303 AL138827.1-201ENST00000402666 306 ntBASIC2.68□□□□□ -1.98
EIF3FO00303 AL591034.2-201ENST00000402839 359 ntBASIC2.68□□□□□ -1.98
EIF3FO00303 AL139396.1-201ENST00000421137 167 ntBASIC2.68□□□□□ -1.98
EIF3FO00303 AL590632.1-201ENST00000424289 371 ntBASIC2.68□□□□□ -1.98
EIF3FO00303 AC087499.2-201ENST00000432861 149 ntBASIC2.68□□□□□ -1.98
EIF3FO00303 AL135938.1-201ENST00000443141 297 ntBASIC2.68□□□□□ -1.98
EIF3FO00303 RNU6-329P-201ENST00000459618 107 ntBASIC2.68□□□□□ -1.98
EIF3FO00303 AC046134.1-201ENST00000514454 666 ntBASIC2.68□□□□□ -1.98
EIF3FO00303 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.68□□□□□ -1.98
EIF3FO00303 SNORA31.11-201ENST00000516528 139 ntBASIC2.68□□□□□ -1.98
EIF3FO00303 SNORA31.16-201ENST00000516773 139 ntBASIC2.68□□□□□ -1.98
EIF3FO00303 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.68□□□□□ -1.98
EIF3FO00303 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.68□□□□□ -1.98
EIF3FO00303 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.68□□□□□ -1.98
EIF3FO00303 LARP7P3-201ENST00000579888 337 ntBASIC2.68□□□□□ -1.98
EIF3FO00303 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
EIF3FO00303 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
EIF3FO00303 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
EIF3FO00303 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
EIF3FO00303 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
EIF3FO00303 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
EIF3FO00303 SNORD62.1-201ENST00000362541 86 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 RNU4-15P-201ENST00000362613 141 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 RNU1-23P-201ENST00000363361 144 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 Y_RNA.301-201ENST00000364990 103 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 SNORA25B-201ENST00000365507 128 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 RNU6-546P-201ENST00000383991 107 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 RNU6-790P-201ENST00000384479 105 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 MIR592-201ENST00000384959 97 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 MIR634-201ENST00000385208 97 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 MTCYBP2-201ENST00000407745 171 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 MTND3P8-201ENST00000412909 339 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.67□□□□□ -1.98
EIF3FO00303 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.67□□□□□ -1.98
EIF3FO00303 RN7SL297P-201ENST00000483161 293 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 MTCO2P30-201ENST00000503662 364 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.67□□□□□ -1.98
EIF3FO00303 PRDX4P1-201ENST00000507189 574 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.67□□□□□ -1.98
EIF3FO00303 RNU6-566P-201ENST00000516790 107 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 RNA5SP454-201ENST00000517231 127 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 IGLV3-17-201ENST00000519099 244 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 AP005639.2-201ENST00000527592 928 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.67□□□□□ -1.98
EIF3FO00303 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.67□□□□□ -1.98
EIF3FO00303 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.67□□□□□ -1.98
EIF3FO00303 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.67□□□□□ -1.98
EIF3FO00303 AL450472.1-202ENST00000637286 180 ntBASIC2.67□□□□□ -1.98
EIF3FO00303 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
EIF3FO00303 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
EIF3FO00303 SNORA18.3-201ENST00000384122 132 ntBASIC2.66□□□□□ -1.98
EIF3FO00303 RNU1-52P-201ENST00000384190 164 ntBASIC2.66□□□□□ -1.98
EIF3FO00303 MIR524-201ENST00000385242 87 ntBASIC2.66□□□□□ -1.98
EIF3FO00303 Y_RNA.597-201ENST00000410463 100 ntBASIC2.66□□□□□ -1.98
EIF3FO00303 RBMX2P4-201ENST00000441256 376 ntBASIC2.66□□□□□ -1.98
EIF3FO00303 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.66□□□□□ -1.98
EIF3FO00303 AC145146.1-201ENST00000496370 254 ntBASIC2.66□□□□□ -1.98
EIF3FO00303 PTP4A1P4-201ENST00000512479 322 ntBASIC2.66□□□□□ -1.98
EIF3FO00303 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.66□□□□□ -1.98
EIF3FO00303 RNU6-273P-201ENST00000516937 96 ntBASIC2.66□□□□□ -1.98
EIF3FO00303 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.66□□□□□ -1.98
EIF3FO00303 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
EIF3FO00303 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.66□□□□□ -1.98
EIF3FO00303 CYCSP26-201ENST00000534107 320 ntBASIC2.66□□□□□ -1.98
EIF3FO00303 CYP4A27P-201ENST00000567218 190 ntBASIC2.66□□□□□ -1.98
EIF3FO00303 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.66□□□□□ -1.98
EIF3FO00303 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.66□□□□□ -1.98
EIF3FO00303 MIR4742-201ENST00000581069 85 ntBASIC2.66□□□□□ -1.98
EIF3FO00303 FGF7P1-201ENST00000582820 288 ntBASIC2.66□□□□□ -1.98
EIF3FO00303 Z98751.3-201ENST00000604447 521 ntBASIC2.66□□□□□ -1.98
EIF3FO00303 AC124303.1-201ENST00000605703 360 ntBASIC2.66□□□□□ -1.98
EIF3FO00303 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.66□□□□□ -1.98
EIF3FO00303 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
EIF3FO00303 CBX3P1-201ENST00000325243 554 ntBASIC2.65□□□□□ -1.99
EIF3FO00303 Y_RNA.123-201ENST00000363338 102 ntBASIC2.65□□□□□ -1.99
EIF3FO00303 Y_RNA.151-201ENST00000363566 112 ntBASIC2.65□□□□□ -1.99
EIF3FO00303 SNORA80A-201ENST00000363922 136 ntBASIC2.65□□□□□ -1.99
EIF3FO00303 U8.8-201ENST00000365399 135 ntBASIC2.65□□□□□ -1.99
EIF3FO00303 RNU6-784P-201ENST00000384330 106 ntBASIC2.65□□□□□ -1.99
EIF3FO00303 RNU1-148P-201ENST00000384472 162 ntBASIC2.65□□□□□ -1.99
EIF3FO00303 MIR517A-201ENST00000385001 87 ntBASIC2.65□□□□□ -1.99
EIF3FO00303 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
EIF3FO00303 RNU2-32P-201ENST00000411193 191 ntBASIC2.65□□□□□ -1.99
EIF3FO00303 COTL1P1-201ENST00000422309 375 ntBASIC2.65□□□□□ -1.99
EIF3FO00303 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.65□□□□□ -1.99
EIF3FO00303 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.65□□□□□ -1.99
EIF3FO00303 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.65□□□□□ -1.99
EIF3FO00303 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.65□□□□□ -1.99
EIF3FO00303 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.65□□□□□ -1.99
EIF3FO00303 AL353572.1-201ENST00000442490 417 ntBASIC2.65□□□□□ -1.99
EIF3FO00303 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.65□□□□□ -1.99
EIF3FO00303 MTND1P17-201ENST00000448961 204 ntBASIC2.65□□□□□ -1.99
EIF3FO00303 RNU6-1088P-201ENST00000516850 104 ntBASIC2.65□□□□□ -1.99
EIF3FO00303 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.65□□□□□ -1.99
EIF3FO00303 AC118273.2-201ENST00000532092 465 ntBASIC2.65□□□□□ -1.99
EIF3FO00303 AC022616.8-201ENST00000533569 253 ntBASIC2.65□□□□□ -1.99
EIF3FO00303 ELOCP29-201ENST00000588193 334 ntBASIC2.65□□□□□ -1.99
EIF3FO00303 POLR3GP2-201ENST00000588366 668 ntBASIC2.65□□□□□ -1.99
EIF3FO00303 AL078605.1-201ENST00000603529 500 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms