Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.24□□□□□ -2.21
DFFAO00273 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
DFFAO00273 SNRPFP4-201ENST00000456366 242 ntBASIC1.24□□□□□ -2.21
DFFAO00273 snoU13.9-201ENST00000458927 103 ntBASIC1.24□□□□□ -2.21
DFFAO00273 MRPS36P3-201ENST00000519284 130 ntBASIC1.24□□□□□ -2.21
DFFAO00273 AC087883.1-201ENST00000551882 391 ntBASIC1.24□□□□□ -2.21
DFFAO00273 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.24□□□□□ -2.21
DFFAO00273 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.24□□□□□ -2.21
DFFAO00273 MIR3136-201ENST00000583498 78 ntBASIC1.24□□□□□ -2.21
DFFAO00273 AC073413.2-201ENST00000604332 360 ntBASIC1.24□□□□□ -2.21
DFFAO00273 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
DFFAO00273 MTND5P9-201ENST00000503854 1755 ntBASIC1.24□□□□□ -2.21
DFFAO00273 MTND5P17-201ENST00000418405 1603 ntBASIC1.23□□□□□ -2.21
DFFAO00273 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
DFFAO00273 RNA5SP432-201ENST00000362480 116 ntBASIC1.23□□□□□ -2.21
DFFAO00273 RNU6-1214P-201ENST00000363650 109 ntBASIC1.23□□□□□ -2.21
DFFAO00273 RNU4-91P-201ENST00000364778 135 ntBASIC1.23□□□□□ -2.21
DFFAO00273 RNU6-26P-201ENST00000383985 107 ntBASIC1.23□□□□□ -2.21
DFFAO00273 RNU6-142P-201ENST00000384019 107 ntBASIC1.23□□□□□ -2.21
DFFAO00273 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.23□□□□□ -2.21
DFFAO00273 AC123900.1-201ENST00000420390 96 ntBASIC1.23□□□□□ -2.21
DFFAO00273 AC104850.1-201ENST00000435940 476 ntBASIC1.23□□□□□ -2.21
DFFAO00273 AL163540.1-201ENST00000485382 386 ntBASIC1.23□□□□□ -2.21
DFFAO00273 AC104136.1-201ENST00000512969 394 ntBASIC1.23□□□□□ -2.21
DFFAO00273 AC090572.1-201ENST00000519251 160 ntBASIC1.23□□□□□ -2.21
DFFAO00273 snoU13.31-201ENST00000607291 104 ntBASIC1.23□□□□□ -2.21
DFFAO00273 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.22□□□□□ -2.21
DFFAO00273 Y_RNA.324-201ENST00000365165 102 ntBASIC1.22□□□□□ -2.21
DFFAO00273 RNU1-78P-201ENST00000391248 165 ntBASIC1.22□□□□□ -2.21
DFFAO00273 RNU2-41P-201ENST00000410991 178 ntBASIC1.22□□□□□ -2.21
DFFAO00273 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.22□□□□□ -2.21
DFFAO00273 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.22□□□□□ -2.21
DFFAO00273 RPS6P15-201ENST00000431996 751 ntBASIC1.22□□□□□ -2.21
DFFAO00273 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.22□□□□□ -2.21
DFFAO00273 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.22□□□□□ -2.21
DFFAO00273 AL022238.1-201ENST00000442557 355 ntBASIC1.22□□□□□ -2.21
DFFAO00273 AC093852.1-201ENST00000503587 266 ntBASIC1.22□□□□□ -2.21
DFFAO00273 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.22□□□□□ -2.21
DFFAO00273 RNU6-377P-201ENST00000515965 102 ntBASIC1.22□□□□□ -2.21
DFFAO00273 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.22□□□□□ -2.21
DFFAO00273 MIR5094-201ENST00000578766 85 ntBASIC1.22□□□□□ -2.21
DFFAO00273 AC110760.3-201ENST00000598794 467 ntBASIC1.22□□□□□ -2.21
DFFAO00273 MIR340-201ENST00000362125 95 ntBASIC1.21□□□□□ -2.22
DFFAO00273 MIR26B-201ENST00000362251 77 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-37P-201ENST00000362692 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-414P-201ENST00000363705 104 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-11P-201ENST00000364234 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-1141P-201ENST00000364520 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 Y_RNA.367-201ENST00000365544 101 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-25P-201ENST00000383873 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-1-201ENST00000383898 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-48P-201ENST00000384161 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-36P-201ENST00000384172 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-4P-201ENST00000384205 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-5P-201ENST00000384238 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-43P-201ENST00000384302 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-3P-201ENST00000384314 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-16P-201ENST00000384385 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-15P-201ENST00000384534 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-296P-201ENST00000384608 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-2-201ENST00000384627 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-29P-201ENST00000384637 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-9-201ENST00000384776 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-33P-201ENST00000384793 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 MIR150-201ENST00000385048 84 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-550P-201ENST00000391057 101 ntBASIC1.21□□□□□ -2.22
DFFAO00273 MTCYBP2-201ENST00000407745 171 ntBASIC1.21□□□□□ -2.22
DFFAO00273 Y_RNA.598-201ENST00000410480 95 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-293P-201ENST00000411259 106 ntBASIC1.21□□□□□ -2.22
DFFAO00273 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.21□□□□□ -2.22
DFFAO00273 AL593851.1-201ENST00000426171 157 ntBASIC1.21□□□□□ -2.22
DFFAO00273 Z82205.1-201ENST00000428456 297 ntBASIC1.21□□□□□ -2.22
DFFAO00273 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.21□□□□□ -2.22
DFFAO00273 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.21□□□□□ -2.22
DFFAO00273 AC015922.2-201ENST00000435593 184 ntBASIC1.21□□□□□ -2.22
DFFAO00273 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.21□□□□□ -2.22
DFFAO00273 MTND1P30-201ENST00000441241 901 ntBASIC1.21□□□□□ -2.22
DFFAO00273 UBE2D3P4-201ENST00000441973 436 ntBASIC1.21□□□□□ -2.22
DFFAO00273 AC079448.1-201ENST00000449377 373 ntBASIC1.21□□□□□ -2.22
DFFAO00273 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.21□□□□□ -2.22
DFFAO00273 AC097473.1-201ENST00000508142 408 ntBASIC1.21□□□□□ -2.22
DFFAO00273 FABP5P5-201ENST00000515537 406 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU2-46P-201ENST00000517038 113 ntBASIC1.21□□□□□ -2.22
DFFAO00273 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
DFFAO00273 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.21□□□□□ -2.22
DFFAO00273 MTND2P32-201ENST00000521584 1038 ntBASIC1.21□□□□□ -2.22
DFFAO00273 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.21□□□□□ -2.22
DFFAO00273 BNIP3P16-201ENST00000589779 534 ntBASIC1.21□□□□□ -2.22
DFFAO00273 AP001485.1-201ENST00000604799 199 ntBASIC1.21□□□□□ -2.22
DFFAO00273 RNU6-6P-201ENST00000606623 107 ntBASIC1.21□□□□□ -2.22
DFFAO00273 MIR6078-201ENST00000611069 100 ntBASIC1.21□□□□□ -2.22
DFFAO00273 AL133173.2-201ENST00000614270 90 ntBASIC1.21□□□□□ -2.22
DFFAO00273 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
DFFAO00273 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.21□□□□□ -2.22
DFFAO00273 AC068205.3-201ENST00000636385 468 ntBASIC1.21□□□□□ -2.22
DFFAO00273 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
DFFAO00273 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.21□□□□□ -2.22
DFFAO00273 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
DFFAO00273 RNU6-692P-201ENST00000384496 107 ntBASIC1.2□□□□□ -2.22
DFFAO00273 MIR1267-201ENST00000408723 78 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms