Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.14□□□□□ -2.07
NPIPA3F8WFD2 AC244670.1-201ENST00000436879 112 ntBASIC2.14□□□□□ -2.07
NPIPA3F8WFD2 UBE2V1P8-201ENST00000437166 265 ntBASIC2.14□□□□□ -2.07
NPIPA3F8WFD2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.14□□□□□ -2.07
NPIPA3F8WFD2 AC010095.1-201ENST00000443543 144 ntBASIC2.14□□□□□ -2.07
NPIPA3F8WFD2 IFNA11P-201ENST00000446352 526 ntBASIC2.14□□□□□ -2.07
NPIPA3F8WFD2 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.14□□□□□ -2.07
NPIPA3F8WFD2 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.14□□□□□ -2.07
NPIPA3F8WFD2 AC082651.2-201ENST00000496833 166 ntBASIC2.14□□□□□ -2.07
NPIPA3F8WFD2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.14□□□□□ -2.07
NPIPA3F8WFD2 SNORA48.11-201ENST00000517015 89 ntBASIC2.14□□□□□ -2.07
NPIPA3F8WFD2 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.14□□□□□ -2.07
NPIPA3F8WFD2 AC103810.6-201ENST00000606708 136 ntBASIC2.14□□□□□ -2.07
NPIPA3F8WFD2 AC104237.2-201ENST00000612456 443 ntBASIC2.14□□□□□ -2.07
NPIPA3F8WFD2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 RNU6-254P-201ENST00000363377 107 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 SNORD32A-201ENST00000364805 84 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 RNU1-148P-201ENST00000384472 162 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 MIR524-201ENST00000385242 87 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 RN7SKP192-201ENST00000411291 327 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 HMGB3P2-201ENST00000411913 584 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 FCF1P9-201ENST00000412546 282 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 AL590135.1-201ENST00000422215 156 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 AC019205.3-201ENST00000424573 156 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 AL139415.2-201ENST00000431968 163 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 AC016700.2-201ENST00000446011 156 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 AMD1P1-201ENST00000457220 922 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 RPL9P9-202ENST00000466501 579 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 AC015911.1-201ENST00000495111 156 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 RPS29P21-201ENST00000496272 170 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 AC091874.1-201ENST00000511402 339 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 AC011352.1-201ENST00000512300 793 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 SNORA4.4-201ENST00000515921 135 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 MTND1P5-201ENST00000517906 940 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 CYCSP26-201ENST00000534107 320 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 AC007375.1-201ENST00000554513 578 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 AP001836.1-201ENST00000604675 523 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 AC068944.2-201ENST00000610373 403 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 FAM157A-202ENST00000615155 405 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 SNORD98-201ENST00000636377 67 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 MIR3662-201ENST00000637030 95 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 AL355596.1-201ENST00000565399 3996 ntBASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
NPIPA3F8WFD2 MTND4P23-201ENST00000447723 1363 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 MIR6073-201ENST00000352083 89 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 RNU6-944P-201ENST00000364023 107 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 SNORA3A-201ENST00000364113 130 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 SNORA25.6-201ENST00000364121 118 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 U8.8-201ENST00000365399 135 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 SNORA25B-201ENST00000365507 128 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 Y_RNA.504-201ENST00000384481 104 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 MIR29B2-201ENST00000385055 81 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 RN7SKP223-201ENST00000410582 62 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 RNU2-32P-201ENST00000411193 191 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 RNU6-373P-201ENST00000411247 98 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 AL590556.1-201ENST00000423231 483 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 AL356320.1-201ENST00000429616 163 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 MTND1P4-201ENST00000435196 415 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 NDUFA5P4-201ENST00000436704 385 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 FTH1P25-201ENST00000447665 469 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 HMGB1P35-201ENST00000503360 598 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 SNORA31.16-201ENST00000516773 139 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 RNU6-612P-201ENST00000516909 102 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 TRAV32-201ENST00000553993 340 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 AC009127.3-201ENST00000570531 403 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 AC067747.1-201ENST00000608026 250 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 MIR6873-201ENST00000622788 63 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 AC100810.6-201ENST00000638068 285 ntBASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NPIPA3F8WFD2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 SNORD113-7-201ENST00000363762 77 ntBASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 RNU6-1317P-201ENST00000364582 104 ntBASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 Y_RNA.597-201ENST00000410463 100 ntBASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 DPH3P2-201ENST00000422618 250 ntBASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 MTND3P9-201ENST00000429526 346 ntBASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 AC007547.1-201ENST00000462177 490 ntBASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 AC018868.1-201ENST00000491307 315 ntBASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 MTCYBP18-201ENST00000501056 747 ntBASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms