Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC66A2RUB6 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
CCDC66A2RUB6 Z75746.1-201ENST00000440243 2080 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC66A2RUB6 Y_RNA.27-201ENST00000362540 103 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 RNU1-76P-201ENST00000362903 159 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 SNORA29-201ENST00000384183 140 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 RNU6-708P-201ENST00000384217 107 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 RNU6-17P-201ENST00000384245 107 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 RNU6-18P-201ENST00000384527 107 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 RPL21P75-201ENST00000396599 483 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 RPL21P28-201ENST00000401418 483 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 RNA5SP390-201ENST00000410191 113 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 RN7SKP111-201ENST00000410349 271 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AL356968.1-201ENST00000416622 474 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AL590556.1-201ENST00000423231 483 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC66A2RUB6 UQCRHP3-201ENST00000451503 251 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 RPL21P39-201ENST00000463605 483 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 SNRPGP7-201ENST00000469016 106 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AC087190.1-201ENST00000484462 480 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AC107032.1-201ENST00000485945 480 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AC132942.1-201ENST00000486753 483 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AC093591.1-201ENST00000491435 481 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AF186996.7-201ENST00000492781 209 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 RPL21P16-201ENST00000495531 483 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC66A2RUB6 SNORD59.2-201ENST00000516873 68 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC66A2RUB6 HSPE1P4-201ENST00000550617 308 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AL442163.3-201ENST00000554110 156 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AC090517.1-201ENST00000569307 266 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AC090897.2-201ENST00000581715 130 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AC107871.2-201ENST00000612894 502 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 AL034408.1-202ENST00000636088 415 ntBASIC3.59□□□□□ -1.83
CCDC66A2RUB6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
CCDC66A2RUB6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC66A2RUB6 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.59□□□□□ -1.84
CCDC66A2RUB6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC66A2RUB6 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC66A2RUB6 RBBP8P1-201ENST00000449447 1844 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC66A2RUB6 AC103988.1-201ENST00000566382 2177 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 Y_RNA.214-201ENST00000364201 112 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 SNORA5A-201ENST00000384111 134 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 RNU6-622P-201ENST00000384272 103 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 Y_RNA.471-201ENST00000384312 102 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 RNU6-1222P-201ENST00000384615 107 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 MT-TG-201ENST00000387429 68 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 RNU1-101P-201ENST00000391171 127 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 RN7SKP61-201ENST00000410642 295 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 CYCSP4-201ENST00000429682 331 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC66A2RUB6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC66A2RUB6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC66A2RUB6 AC087477.1-201ENST00000465747 340 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 AC016632.1-201ENST00000503994 196 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC66A2RUB6 SNORA31.1-201ENST00000515993 133 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 RN7SKP18-201ENST00000516005 275 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 SNORA31.5-201ENST00000516190 133 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 RNU1-143P-201ENST00000516296 146 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC66A2RUB6 AC090617.3-201ENST00000573670 475 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC66A2RUB6 AL355877.2-201ENST00000603670 358 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 U1.23-201ENST00000610293 146 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 RNU1-68P-201ENST00000615382 146 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 MIR8062-201ENST00000621515 85 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 U1.39-201ENST00000621562 146 ntBASIC3.58□□□□□ -1.84
CCDC66A2RUB6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CCDC66A2RUB6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC66A2RUB6 SNORA71.3-201ENST00000362582 128 ntBASIC3.57□□□□□ -1.84
CCDC66A2RUB6 RNU5B-2P-201ENST00000363036 113 ntBASIC3.57□□□□□ -1.84
CCDC66A2RUB6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC66A2RUB6 Y_RNA.504-201ENST00000384481 104 ntBASIC3.57□□□□□ -1.84
CCDC66A2RUB6 MIR32-201ENST00000384965 70 ntBASIC3.57□□□□□ -1.84
CCDC66A2RUB6 ELOCP20-201ENST00000422460 345 ntBASIC3.57□□□□□ -1.84
CCDC66A2RUB6 PTGES3P4-201ENST00000426243 356 ntBASIC3.57□□□□□ -1.84
CCDC66A2RUB6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC66A2RUB6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC66A2RUB6 RPL39P40-201ENST00000445481 146 ntBASIC3.57□□□□□ -1.84
CCDC66A2RUB6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC66A2RUB6 AC107626.1-201ENST00000471084 183 ntBASIC3.57□□□□□ -1.84
CCDC66A2RUB6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC66A2RUB6 RNU6-1143P-201ENST00000516125 104 ntBASIC3.57□□□□□ -1.84
CCDC66A2RUB6 RNU6-397P-201ENST00000516226 104 ntBASIC3.57□□□□□ -1.84
CCDC66A2RUB6 SNORA40.15-201ENST00000516884 107 ntBASIC3.57□□□□□ -1.84
CCDC66A2RUB6 RN7SKP272-201ENST00000516988 232 ntBASIC3.57□□□□□ -1.84
CCDC66A2RUB6 AC026403.1-201ENST00000518938 295 ntBASIC3.57□□□□□ -1.84
CCDC66A2RUB6 AC007375.1-201ENST00000554513 578 ntBASIC3.57□□□□□ -1.84
CCDC66A2RUB6 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC66A2RUB6 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC66A2RUB6 MIR5571-201ENST00000577998 113 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms