Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC189A1A4V9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -1.99
CCDC189A1A4V9 Y_RNA.41-201ENST00000362646 102 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 SNORD115-3-201ENST00000363100 82 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 Y_RNA.167-201ENST00000363735 109 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 SNORD113-7-201ENST00000363762 77 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 RNU6-234P-201ENST00000365229 104 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 RNU1-51P-201ENST00000365345 176 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 Y_RNA.402-201ENST00000383972 102 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 SNORA44-201ENST00000384584 132 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 MIR634-201ENST00000385208 97 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CCDC189A1A4V9 RNU6-780P-201ENST00000391030 104 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 MIR450B-201ENST00000401182 78 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 Z92545.1-201ENST00000411782 234 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 AC012306.1-201ENST00000423267 114 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC189A1A4V9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC189A1A4V9 SRIP2-201ENST00000428470 166 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC189A1A4V9 AL135938.1-201ENST00000443141 297 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC189A1A4V9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC189A1A4V9 RPS27P21-201ENST00000486977 252 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 MTCO1P29-201ENST00000496868 288 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC189A1A4V9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.59□□□□□ -1.99
CCDC189A1A4V9 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC189A1A4V9 MIR514B-201ENST00000516774 80 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 AC104576.1-201ENST00000524225 88 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC189A1A4V9 AC109446.1-201ENST00000566172 220 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 BNIP3P25-201ENST00000596023 559 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 AC006023.1-201ENST00000603944 259 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 AC012557.2-201ENST00000605919 418 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 AC068944.2-201ENST00000610373 403 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 U1.36-201ENST00000620684 176 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 AL450472.1-202ENST00000637286 180 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.59□□□□□ -1.99
CCDC189A1A4V9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC189A1A4V9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
CCDC189A1A4V9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.59□□□□□ -2
CCDC189A1A4V9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CCDC189A1A4V9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC189A1A4V9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC189A1A4V9 RNU1-58P-201ENST00000362413 163 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 Y_RNA.318-201ENST00000365131 97 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 U8.8-201ENST00000365399 135 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 RNU6-933P-201ENST00000384424 107 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 AL360182.1-201ENST00000397433 468 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 RNU6-373P-201ENST00000411247 98 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 AL158823.1-201ENST00000418441 478 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 USP9YP20-201ENST00000419224 558 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 MTCO1P20-201ENST00000425366 358 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.58□□□□□ -2
CCDC189A1A4V9 AC091874.1-201ENST00000511402 339 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 RNA5SP490-201ENST00000517141 136 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 AK6P1-201ENST00000540219 478 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.58□□□□□ -2
CCDC189A1A4V9 AL109918.3-201ENST00000603072 338 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 AL078605.1-201ENST00000603529 500 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 CYP2C61P-201ENST00000604072 290 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 AL022345.1-201ENST00000607292 135 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.58□□□□□ -2
CCDC189A1A4V9 U4.5-201ENST00000617137 123 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 SNORA43.4-201ENST00000629559 138 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 AP000553.5-201ENST00000641933 54 ntBASIC2.58□□□□□ -2
CCDC189A1A4V9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.57□□□□□ -2
CCDC189A1A4V9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CCDC189A1A4V9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.57□□□□□ -2
CCDC189A1A4V9 Y_RNA.100-201ENST00000363141 102 ntBASIC2.57□□□□□ -2
CCDC189A1A4V9 RNU6-160P-201ENST00000384591 107 ntBASIC2.57□□□□□ -2
CCDC189A1A4V9 Y_RNA.573-201ENST00000384763 105 ntBASIC2.57□□□□□ -2
CCDC189A1A4V9 AL356379.1-201ENST00000414105 126 ntBASIC2.57□□□□□ -2
CCDC189A1A4V9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.57□□□□□ -2
CCDC189A1A4V9 RPS29P27-201ENST00000463711 170 ntBASIC2.57□□□□□ -2
CCDC189A1A4V9 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.57□□□□□ -2
CCDC189A1A4V9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.57□□□□□ -2
CCDC189A1A4V9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.57□□□□□ -2
CCDC189A1A4V9 AC026371.1-201ENST00000551867 419 ntBASIC2.57□□□□□ -2
CCDC189A1A4V9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.57□□□□□ -2
CCDC189A1A4V9 ELOCP29-201ENST00000588193 334 ntBASIC2.57□□□□□ -2
CCDC189A1A4V9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.57□□□□□ -2
CCDC189A1A4V9 AL162373.1-201ENST00000620433 407 ntBASIC2.57□□□□□ -2
CCDC189A1A4V9 Y_RNA.530-201ENST00000384587 101 ntBASIC2.56□□□□□ -2
CCDC189A1A4V9 SNORA12-201ENST00000391162 147 ntBASIC2.56□□□□□ -2
CCDC189A1A4V9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC189A1A4V9 NDUFB4P4-201ENST00000404822 243 ntBASIC2.56□□□□□ -2
CCDC189A1A4V9 MTCO1P21-201ENST00000416634 589 ntBASIC2.56□□□□□ -2
CCDC189A1A4V9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.56□□□□□ -2
CCDC189A1A4V9 MTND1P34-201ENST00000438556 671 ntBASIC2.56□□□□□ -2
CCDC189A1A4V9 AL353689.1-201ENST00000438895 199 ntBASIC2.56□□□□□ -2
CCDC189A1A4V9 AC083904.1-201ENST00000487828 231 ntBASIC2.56□□□□□ -2
CCDC189A1A4V9 AC092436.3-201ENST00000511788 257 ntBASIC2.56□□□□□ -2
CCDC189A1A4V9 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.56□□□□□ -2
CCDC189A1A4V9 RNU6-991P-201ENST00000516168 107 ntBASIC2.56□□□□□ -2
CCDC189A1A4V9 RNU6-1332P-201ENST00000516666 104 ntBASIC2.56□□□□□ -2
CCDC189A1A4V9 MTND1P5-201ENST00000517906 940 ntBASIC2.56□□□□□ -2
CCDC189A1A4V9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.56□□□□□ -2
CCDC189A1A4V9 MIR4448-201ENST00000584360 86 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms