Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 S100A11P2-201ENST00000467589 312 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 RPL31P41-201ENST00000477967 372 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 AC025518.1-201ENST00000479856 347 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 AC110794.1-201ENST00000505816 425 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 PHBP14-201ENST00000512887 367 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 RNU6-635P-201ENST00000516651 102 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 AC090617.3-201ENST00000573670 475 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 MIR5680-201ENST00000577577 84 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 AL162713.1-201ENST00000604480 262 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 AL159153.1-201ENST00000619688 317 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 AL359854.1-201ENST00000614203 1594 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 AP000560.1-201ENST00000624150 1937 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 Y_RNA.153-201ENST00000363615 91 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 SNORD115-32-201ENST00000364079 82 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 Y_RNA.319-201ENST00000365138 92 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 RNU1-57P-201ENST00000384491 166 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 Y_RNA.510-201ENST00000384511 114 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 Y_RNA.526-201ENST00000384572 110 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 MIR208B-201ENST00000401172 77 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 HMGB3P2-201ENST00000411913 584 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 AL513477.1-202ENST00000417061 214 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 AL358176.2-201ENST00000425769 204 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 AL353705.1-201ENST00000433468 480 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 HMGB1P35-201ENST00000503360 598 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 SEM1P1-201ENST00000506694 209 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 RNU2-53P-201ENST00000516257 147 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 RNU6-567P-201ENST00000516746 107 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 AC131281.1-201ENST00000522984 164 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 AL117187.1-201ENST00000555482 181 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 MIR3923-201ENST00000579521 83 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 MIR3136-201ENST00000583498 78 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 AL138963.2-201ENST00000605137 226 ntBASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC163A0A0D9SF12 Z83843.1-201ENST00000604070 3685 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 AC138915.1-201ENST00000565427 1685 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 OR56A5-201ENST00000340110 738 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 RNU6-655P-201ENST00000362858 107 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 Y_RNA.152-201ENST00000363578 100 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 Y_RNA.210-201ENST00000364161 110 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 MIR549A-201ENST00000385268 96 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 RPL21P75-201ENST00000396599 483 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 RPL21P28-201ENST00000401418 483 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 AL590556.1-201ENST00000423231 483 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 AP000705.1-201ENST00000454567 350 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 RPL21P39-201ENST00000463605 483 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 AC087190.1-201ENST00000484462 480 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 AC107032.1-201ENST00000485945 480 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 AC132942.1-201ENST00000486753 483 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 AC093591.1-201ENST00000491435 481 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 RPL21P16-201ENST00000495531 483 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 RNU6-397P-201ENST00000516226 104 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 RN7SKP209-201ENST00000516888 304 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 Y_RNA.715-201ENST00000517082 110 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 AC109329.1-201ENST00000518744 317 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 MIR5695-201ENST00000579717 85 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 KLKP1-201ENST00000595979 403 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 AL034555.1-201ENST00000604816 211 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 AC005296.1-201ENST00000616145 209 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 CEP170P1-201ENST00000502249 4587 ntBASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC163A0A0D9SF12 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 snoU2_19.1-201ENST00000362361 80 ntBASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 Y_RNA.133-201ENST00000363428 110 ntBASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 Y_RNA.471-201ENST00000384312 102 ntBASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 RNU4-47P-201ENST00000410876 114 ntBASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 RNA5SP306-201ENST00000411087 107 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms