Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC015911.1-201ENST00000495111 156 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC108210.2-201ENST00000503681 201 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC005741.1-201ENST00000511094 432 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNA5SP503-201ENST00000517047 117 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AP003033.1-201ENST00000527244 415 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL161670.1-201ENST00000554348 137 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 BNIP3P16-201ENST00000589779 534 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 MIR8074-201ENST00000615081 81 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 MIR7974-201ENST00000615835 79 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 MIR7843-201ENST00000622274 79 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AF246928.1-201ENST00000623768 87 ntBASIC1.1□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU6-428P-201ENST00000362942 107 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU6-1141P-201ENST00000364520 107 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 SNORA72.3-201ENST00000365074 132 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 U8.10-201ENST00000384260 133 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 MIR454-201ENST00000390180 115 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL031577.2-201ENST00000404133 280 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 HMGN1P14-201ENST00000412459 517 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC010975.2-201ENST00000427781 588 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RPL31P35-201ENST00000431058 377 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL596276.1-201ENST00000434465 418 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC244670.1-201ENST00000436879 112 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC112492.4-201ENST00000456549 352 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RPS29P15-201ENST00000458329 171 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU1-123P-201ENST00000458950 160 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU7-182P-201ENST00000459009 62 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 MTCYBP18-201ENST00000501056 747 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC021146.2-201ENST00000504736 556 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 SNORA31.16-201ENST00000516773 139 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU6-232P-201ENST00000517144 64 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC109479.2-201ENST00000517842 174 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC087441.2-201ENST00000529141 262 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 SUB1P4-201ENST00000566062 339 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC123912.5-201ENST00000605470 343 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 Z99289.3-201ENST00000605586 594 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 MIR98-201ENST00000606724 119 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL603839.4-201ENST00000624658 1005 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 SEPT14P19-203ENST00000633205 211 ntBASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.09□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AP000560.1-201ENST00000624150 1937 ntBASIC1.09□□□□□ -2.24
IGHV3-43A0A0B4J1X8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RNU4-56P-201ENST00000364700 142 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RNU6-1029P-201ENST00000384109 107 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RNU6-74P-201ENST00000384235 107 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 MIR1-2-201ENST00000384961 85 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 SNORA40.3-201ENST00000390964 122 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RNU4-62P-201ENST00000410125 130 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RNU4-46P-201ENST00000410818 138 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 MTCO3P41-201ENST00000414801 328 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC009961.2-201ENST00000435771 251 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RNU1-131P-201ENST00000458943 161 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 MTCO3P7-201ENST00000510008 774 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC025465.3-201ENST00000510570 311 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 SNORD27.1-201ENST00000516319 72 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RNU6-759P-201ENST00000516740 103 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AP003072.2-201ENST00000527756 676 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC022880.1-201ENST00000534017 973 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC008015.1-201ENST00000555505 465 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC068338.1-201ENST00000565567 176 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC109446.1-201ENST00000566172 220 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 MIR4775-201ENST00000581168 75 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC012507.3-201ENST00000603556 477 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 Z84480.1-201ENST00000605131 311 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC008945.2-201ENST00000606056 604 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC079248.2-201ENST00000623779 326 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC022513.1-201ENST00000624512 117 ntBASIC1.08□□□□□ -2.24
IGHV3-43A0A0B4J1X8 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.07□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RNA5SP99-201ENST00000364020 114 ntBASIC1.07□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RNU6-553P-201ENST00000364047 96 ntBASIC1.07□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RNU6-108P-201ENST00000365558 107 ntBASIC1.07□□□□□ -2.24
IGHV3-43A0A0B4J1X8 MIR758-201ENST00000390227 88 ntBASIC1.07□□□□□ -2.24
IGHV3-43A0A0B4J1X8 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.07□□□□□ -2.24
IGHV3-43A0A0B4J1X8 MTND3P17-201ENST00000416968 344 ntBASIC1.07□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC123900.1-201ENST00000420390 96 ntBASIC1.07□□□□□ -2.24
IGHV3-43A0A0B4J1X8 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.07□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.07□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.07□□□□□ -2.24
IGHV3-43A0A0B4J1X8 SNRPEP8-201ENST00000442866 260 ntBASIC1.07□□□□□ -2.24
IGHV3-43A0A0B4J1X8 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
IGHV3-43A0A0B4J1X8 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.07□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.07□□□□□ -2.24
IGHV3-43A0A0B4J1X8 MTCYBP35-201ENST00000503630 1137 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms