Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 AL627390.1-201ENST00000396055 340 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 RNU2-3P-201ENST00000410144 191 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 AL365203.2-201ENST00000423444 196 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC104850.1-201ENST00000435940 476 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 MTCO1P44-201ENST00000441935 243 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 AL033528.1-201ENST00000453780 140 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC098862.1-201ENST00000504991 413 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC104806.1-201ENST00000508720 308 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 SNORD27.1-201ENST00000516319 72 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 RN7SKP287-201ENST00000516546 266 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 SNORA31.17-201ENST00000516953 127 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC008015.1-201ENST00000555505 465 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC109446.2-201ENST00000567872 497 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC018889.1-201ENST00000605372 397 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 MIR502-201ENST00000606349 86 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC009159.2-201ENST00000617603 606 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 AL603839.4-201ENST00000624658 1005 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 MIR1248-201ENST00000629190 106 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 MTND4P23-201ENST00000447723 1363 ntBASIC1.41□□□□□ -2.18
COMMD3-BMI1R4GMX3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-45P-201ENST00000384471 107 ntBASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU4-46P-201ENST00000410818 138 ntBASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC011233.1-201ENST00000422812 283 ntBASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC009961.2-201ENST00000435771 251 ntBASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC245517.4-201ENST00000448601 281 ntBASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU7-182P-201ENST00000459009 62 ntBASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-415P-201ENST00000516252 97 ntBASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC103987.3-201ENST00000582071 292 ntBASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 MIR3136-201ENST00000583498 78 ntBASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC098848.2-201ENST00000588023 330 ntBASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC025811.1-201ENST00000604312 472 ntBASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC093424.1-201ENST00000604999 338 ntBASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 AP000654.2-201ENST00000605633 586 ntBASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL121992.2-201ENST00000606262 256 ntBASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC023510.2-201ENST00000622162 746 ntBASIC1.4□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-527P-201ENST00000363425 104 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNA5SP493-201ENST00000364115 91 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 SNORD26-201ENST00000384147 75 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 Y_RNA.480-201ENST00000384364 102 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 MIR764-201ENST00000390811 85 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 HMGN1P14-201ENST00000412459 517 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 MTND3P17-201ENST00000416968 344 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC015922.2-201ENST00000435593 184 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL122001.1-201ENST00000457027 370 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC010409.1-201ENST00000487382 476 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC099513.1-201ENST00000490423 301 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 Y_RNA.675-201ENST00000516389 149 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 AP002453.2-201ENST00000533503 320 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC073539.2-201ENST00000597113 165 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC245014.2-201ENST00000603689 287 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC246785.4-201ENST00000605374 287 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 Z99289.3-201ENST00000605586 594 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 BX248123.2-201ENST00000606318 124 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL360219.1-201ENST00000610230 366 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 SEPT14P19-203ENST00000633205 211 ntBASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
COMMD3-BMI1R4GMX3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-1287P-201ENST00000362914 107 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-1285P-201ENST00000363480 105 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-414P-201ENST00000363705 104 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-1060P-201ENST00000384664 107 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 Y_RNA.560-201ENST00000384689 102 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 MIR1304-201ENST00000408243 91 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL596276.1-201ENST00000434465 418 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 SNORD42A-201ENST00000459584 64 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 MTND3P25-201ENST00000509243 135 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC009646.1-201ENST00000510455 318 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNA5SP445-201ENST00000515889 115 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 AP003034.1-201ENST00000534621 422 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 ZNF321P-202ENST00000550843 495 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms