Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 NACAP3-201ENST00000552100 481 ntBASIC2.73□□□□□ -1.97
SNX9Q9Y5X1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.73□□□□□ -1.97
SNX9Q9Y5X1 AL161423.1-201ENST00000613700 262 ntBASIC2.73□□□□□ -1.97
SNX9Q9Y5X1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SNX9Q9Y5X1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 RNU6-78P-201ENST00000362897 107 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 Y_RNA.151-201ENST00000363566 112 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 RNU6-1188P-201ENST00000363795 107 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 RNU1-100P-201ENST00000365255 165 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 RNU6-827P-201ENST00000365553 106 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 MIR27B-201ENST00000385129 97 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 RNU6-1304P-201ENST00000411374 106 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 AL030996.1-201ENST00000411430 235 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 RNU7-152P-201ENST00000458982 64 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 HMGN1P13-201ENST00000505795 138 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 AC116337.1-201ENST00000509680 687 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 RPL39P5-202ENST00000512505 151 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 SNORA43.2-201ENST00000516652 128 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 Y_RNA.701-201ENST00000516812 110 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 CKS1BP7-201ENST00000522230 235 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 AC090616.3-201ENST00000582184 217 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 MIR3616-201ENST00000584070 92 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 MIR6128-201ENST00000615528 109 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 AC090574.1-201ENST00000623186 233 ntBASIC2.72□□□□□ -1.97
SNX9Q9Y5X1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
SNX9Q9Y5X1 MIR449A-201ENST00000362113 91 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 RNU6-428P-201ENST00000362942 107 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 Y_RNA.259-201ENST00000364619 101 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 RNU6-593P-201ENST00000364716 112 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 Y_RNA.460-201ENST00000384255 102 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 RNU6-1297P-201ENST00000384415 104 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 RPS29P13-201ENST00000402041 169 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 RNU6-370P-201ENST00000411008 104 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 FTH1P25-201ENST00000447665 469 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 SNORD5.1-201ENST00000458800 75 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 AC073901.1-201ENST00000462471 408 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 AC005741.1-201ENST00000511094 432 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 PTP4A1P4-201ENST00000512479 322 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 RNU6-1016P-201ENST00000516689 94 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 RNU6-1153P-201ENST00000516760 105 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 SNORA31.18-201ENST00000517043 134 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 AC006199.1-201ENST00000548728 219 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 AC103996.1-201ENST00000555468 102 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 AC018462.2-201ENST00000605375 395 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 AC124303.1-201ENST00000605703 360 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 AL160413.1-201ENST00000622780 310 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 SCARNA4-202ENST00000625402 129 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 AC243829.7-201ENST00000633081 225 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SNX9Q9Y5X1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 Y_RNA.473-201ENST00000384333 102 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 RNU6-601P-201ENST00000384540 107 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 RNU6-306P-201ENST00000384617 107 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 RNY4P36-201ENST00000391116 96 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 RNU6-325P-201ENST00000411132 105 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 SUMO1P4-201ENST00000429430 302 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 USP9YP30-201ENST00000430729 455 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 CR769767.1-201ENST00000436337 346 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 AL031274.1-201ENST00000450334 232 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 BTF3P15-201ENST00000455606 336 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 RNU6-1037P-201ENST00000459571 107 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 AC116655.1-201ENST00000508324 901 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 RNU6-581P-201ENST00000516214 105 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 Y_RNA.670-201ENST00000516255 105 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 RNU6-1213P-201ENST00000517075 94 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 AC109479.2-201ENST00000517842 174 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 AC027176.1-201ENST00000560204 514 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 AL356575.1-201ENST00000603008 283 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 AP000654.2-201ENST00000605633 586 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 AC011890.2-201ENST00000613393 294 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 U4.3-201ENST00000621047 82 ntBASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms