Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 Z75746.1-201ENST00000440243 2080 ntBASIC2.71□□□□□ -1.98
CLDN16Q9Y5I7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.71□□□□□ -1.98
CLDN16Q9Y5I7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN16Q9Y5I7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.71□□□□□ -1.98
CLDN16Q9Y5I7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 SNORA38-201ENST00000363946 132 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 SNORA9.2-201ENST00000365361 133 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 Y_RNA.504-201ENST00000384481 104 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 RNU6-851P-201ENST00000384565 107 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 RN7SKP58-201ENST00000411010 305 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 HMGN2P35-201ENST00000412164 270 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 NUP35P1-201ENST00000422734 947 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 FO393415.2-201ENST00000480085 343 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 AC083906.5-201ENST00000503722 328 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 RNA5SP112-201ENST00000515937 99 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 AC011494.1-201ENST00000596454 237 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 AC078795.3-201ENST00000602913 472 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 AC073410.2-201ENST00000603240 332 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 AL356280.1-201ENST00000603614 379 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 AP000654.2-201ENST00000605633 586 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 AL627309.6-201ENST00000606857 840 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 AL359314.1-201ENST00000616913 261 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 AC002543.1-201ENST00000299783 1954 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 AC073544.1-201ENST00000600110 1595 ntBASIC2.7□□□□□ -1.98
CLDN16Q9Y5I7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 AC010329.5-201ENST00000623497 2174 ntBASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 RNU6-1010P-201ENST00000362757 107 ntBASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 RNU1-35P-201ENST00000362782 153 ntBASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 RNU6-1188P-201ENST00000363795 107 ntBASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 Y_RNA.509-201ENST00000384506 99 ntBASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 MIR218-1-201ENST00000384999 110 ntBASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 SUMO1P4-201ENST00000429430 302 ntBASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 SNORD19B-201ENST00000459623 84 ntBASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 RPS29P27-201ENST00000463711 170 ntBASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 SCARNA13-201ENST00000516672 275 ntBASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 AC090616.3-201ENST00000582184 217 ntBASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 AL356157.2-201ENST00000605122 111 ntBASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 AC133104.2-201ENST00000615272 193 ntBASIC2.69□□□□□ -1.98
CLDN16Q9Y5I7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 OR56A5-201ENST00000340110 738 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 RNU6-486P-201ENST00000363116 107 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 RNU6-529P-201ENST00000363383 104 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 SNORA80A-201ENST00000363922 136 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 RNU6-1141P-201ENST00000364520 107 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 RNU6-142P-201ENST00000384019 107 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 RNU6-842P-201ENST00000384269 107 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 RNY4P36-201ENST00000391116 96 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 RNU2-23P-201ENST00000410545 195 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 AC244670.1-201ENST00000436879 112 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 AC104389.3-201ENST00000445629 235 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 AC096576.1-201ENST00000489014 359 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 AC104564.1-201ENST00000493028 407 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 SCGB1D5P-201ENST00000515134 247 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 RNU6-307P-201ENST00000516743 106 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 Y_RNA.718-201ENST00000517110 102 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 AC115990.1-201ENST00000526957 301 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 AC079598.5-201ENST00000547460 117 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 AC079600.2-201ENST00000550076 130 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 HMGB1P24-202ENST00000615653 685 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 AC090574.1-201ENST00000623186 233 ntBASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.68□□□□□ -1.98
CLDN16Q9Y5I7 Y_RNA.11-201ENST00000362375 109 ntBASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 Y_RNA.48-201ENST00000362710 103 ntBASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 SNORD32A-201ENST00000364805 84 ntBASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 Y_RNA.404-201ENST00000383978 102 ntBASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 Y_RNA.431-201ENST00000384086 102 ntBASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 Y_RNA.535-201ENST00000384612 99 ntBASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 RNU6-310P-201ENST00000384655 107 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms