Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC007098.1-201ENST00000420122 367 ntBASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 RPL23AP95-201ENST00000426806 265 ntBASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 S100A11P2-201ENST00000467589 312 ntBASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 AC104564.1-201ENST00000493028 407 ntBASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 GZMAP1-201ENST00000503054 631 ntBASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 AL590705.4-201ENST00000532209 134 ntBASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 AC016256.1-201ENST00000547971 354 ntBASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 AC105137.2-201ENST00000569073 466 ntBASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 AC090897.2-201ENST00000581715 130 ntBASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 MIR3149-201ENST00000584629 83 ntBASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 AC006006.1-201ENST00000603082 144 ntBASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 AC007792.1-201ENST00000623023 402 ntBASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 AC091812.1-201ENST00000432235 1948 ntBASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
PCDHB1Q9Y5F3 AC233981.2-201ENST00000611524 1614 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 MAPK10-322ENST00000641485 4530 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 Y_RNA.47-201ENST00000362697 108 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 RNA5SP139-201ENST00000364340 117 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 RNU6-99P-201ENST00000364721 107 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 SNORD32A-201ENST00000364805 84 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 RNU1-140P-201ENST00000365040 165 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 MIR625-201ENST00000385047 85 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 RNU1-101P-201ENST00000391171 127 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 SNORA48.8-201ENST00000391324 134 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 AL138885.1-201ENST00000405921 675 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 AC078809.1-201ENST00000427601 140 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 RPL39P29-201ENST00000447779 157 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 RPL27AP5-201ENST00000469428 449 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 AC105758.1-201ENST00000506038 399 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 MTCO2P24-201ENST00000515611 426 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 AC009812.2-201ENST00000517657 457 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 GNAI2P1-201ENST00000541815 315 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 MIR5701-3-201ENST00000578890 82 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 MIR5701-1-201ENST00000585138 82 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 AC060766.3-201ENST00000591442 263 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 AC092447.9-201ENST00000603395 144 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 AL355877.2-201ENST00000603670 358 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 AL162713.1-201ENST00000604480 262 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 AC073657.2-201ENST00000605661 303 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 AC090425.1-201ENST00000610007 140 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 MIR5701-2-201ENST00000615634 82 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 ZNF72P-201ENST00000425869 1908 ntBASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHB1Q9Y5F3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 AC091564.4-201ENST00000533934 2194 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 RNU1-70P-201ENST00000362618 164 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 RNU4-9P-201ENST00000364951 139 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 Y_RNA.314-201ENST00000365114 102 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 Y_RNA.512-201ENST00000384518 102 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 OSTCP8-201ENST00000445117 448 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 CHEK2P4-201ENST00000450340 246 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 AC006445.1-201ENST00000491925 405 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 AC016632.1-201ENST00000503994 196 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 MTND4LP22-201ENST00000508209 276 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 RNU7-175P-201ENST00000515915 61 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 AC144568.1-201ENST00000520139 137 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 AC007375.1-201ENST00000554513 578 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 AC004584.2-201ENST00000570407 410 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 SNORD58B-201ENST00000607313 66 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 uc_338.14-201ENST00000613162 166 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 AL138825.1-201ENST00000618587 192 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 AC138305.3-201ENST00000624988 240 ntBASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHB1Q9Y5F3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 Y_RNA.39-201ENST00000362620 98 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 RNA5SP383-201ENST00000362934 120 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 SNORA80A-201ENST00000363922 136 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 RNY3P11-201ENST00000364153 102 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 SET-203ENST00000372688 801 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 RNU6-1286P-201ENST00000383871 107 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 RNU6-968P-201ENST00000384076 107 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 RN7SKP61-201ENST00000410642 295 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 RNA5SP229-201ENST00000410809 99 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms