Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 RNU6-1-201ENST00000383898 107 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RNU6-48P-201ENST00000384161 107 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RNU6-36P-201ENST00000384172 107 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RNU6-4P-201ENST00000384205 107 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RNU6-5P-201ENST00000384238 107 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RNU6-3P-201ENST00000384314 107 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RNU6-16P-201ENST00000384385 107 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RNU6-15P-201ENST00000384534 107 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RNU6-2-201ENST00000384627 107 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RNU6-29P-201ENST00000384637 107 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RNU6-9-201ENST00000384776 107 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RNU6-33P-201ENST00000384793 107 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 SNORA26.8-201ENST00000391306 124 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RNA5SP501-201ENST00000410990 112 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 SDAD1P3-201ENST00000427380 333 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.33□□□□□ -2.2
LRRC42Q9Y546 AC243964.1-201ENST00000441814 261 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.33□□□□□ -2.2
LRRC42Q9Y546 AC007677.1-201ENST00000445757 515 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 SNRPGP9-201ENST00000456025 225 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RPS29P15-201ENST00000458329 171 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 MTCO2P6-201ENST00000463134 685 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.33□□□□□ -2.2
LRRC42Q9Y546 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.33□□□□□ -2.2
LRRC42Q9Y546 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.33□□□□□ -2.2
LRRC42Q9Y546 AC093259.1-201ENST00000509755 300 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.33□□□□□ -2.2
LRRC42Q9Y546 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LRRC42Q9Y546 AC023050.3-201ENST00000541142 333 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 AC018889.1-201ENST00000605372 397 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 AC123912.5-201ENST00000605470 343 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 Z99289.3-201ENST00000605586 594 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RNU6-6P-201ENST00000606623 107 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 AC006566.1-201ENST00000608943 513 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RMST_6.1-201ENST00000611980 203 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 SEPT14P19-203ENST00000633205 211 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RNU4-15P-201ENST00000362613 141 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LRRC42Q9Y546 MIR517C-201ENST00000385103 95 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 SNORA26.9-201ENST00000391322 122 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 RNU4-46P-201ENST00000410818 138 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 MTND2P18-201ENST00000419962 1030 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 AL358453.1-201ENST00000422522 250 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.32□□□□□ -2.2
LRRC42Q9Y546 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.32□□□□□ -2.2
LRRC42Q9Y546 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.32□□□□□ -2.2
LRRC42Q9Y546 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.32□□□□□ -2.2
LRRC42Q9Y546 RNU1-41P-201ENST00000516161 162 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 RNU1-48P-201ENST00000516400 162 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 SNORA25.15-201ENST00000516487 89 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.32□□□□□ -2.2
LRRC42Q9Y546 AC115990.1-201ENST00000526957 301 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.32□□□□□ -2.2
LRRC42Q9Y546 AC137800.2-201ENST00000574375 120 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 MIR4703-201ENST00000577728 79 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 MIR3683-201ENST00000580847 82 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 AC008752.3-201ENST00000588113 712 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.32□□□□□ -2.2
LRRC42Q9Y546 AC245014.2-201ENST00000603689 287 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 AL034555.1-201ENST00000604816 211 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 AC246785.4-201ENST00000605374 287 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 AC087683.2-201ENST00000611384 326 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 AL603755.1-201ENST00000619504 163 ntBASIC1.32□□□□□ -2.2
LRRC42Q9Y546 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LRRC42Q9Y546 RNU6-661P-201ENST00000362409 107 ntBASIC1.31□□□□□ -2.2
LRRC42Q9Y546 U8.1-201ENST00000362843 134 ntBASIC1.31□□□□□ -2.2
LRRC42Q9Y546 SNORD32B-201ENST00000364460 84 ntBASIC1.31□□□□□ -2.2
LRRC42Q9Y546 RNU6-336P-201ENST00000364891 107 ntBASIC1.31□□□□□ -2.2
LRRC42Q9Y546 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.31□□□□□ -2.2
LRRC42Q9Y546 MTCO2P34-201ENST00000421994 607 ntBASIC1.31□□□□□ -2.2
LRRC42Q9Y546 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.31□□□□□ -2.2
LRRC42Q9Y546 AL590556.1-201ENST00000423231 483 ntBASIC1.31□□□□□ -2.2
LRRC42Q9Y546 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.31□□□□□ -2.2
LRRC42Q9Y546 MTND1P18-201ENST00000448191 573 ntBASIC1.31□□□□□ -2.2
LRRC42Q9Y546 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.31□□□□□ -2.2
LRRC42Q9Y546 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.31□□□□□ -2.2
LRRC42Q9Y546 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.31□□□□□ -2.2
LRRC42Q9Y546 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.31□□□□□ -2.2
LRRC42Q9Y546 RNU6-295P-201ENST00000516901 104 ntBASIC1.31□□□□□ -2.2
LRRC42Q9Y546 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.31□□□□□ -2.2
LRRC42Q9Y546 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.31□□□□□ -2.2
LRRC42Q9Y546 CYP2C61P-201ENST00000604072 290 ntBASIC1.31□□□□□ -2.2
LRRC42Q9Y546 Z84480.1-201ENST00000605131 311 ntBASIC1.31□□□□□ -2.2
LRRC42Q9Y546 AC008945.2-201ENST00000606056 604 ntBASIC1.31□□□□□ -2.2
LRRC42Q9Y546 BX248123.2-201ENST00000606318 124 ntBASIC1.31□□□□□ -2.2
LRRC42Q9Y546 AC022418.1-201ENST00000624118 445 ntBASIC1.31□□□□□ -2.2
LRRC42Q9Y546 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.31□□□□□ -2.2
LRRC42Q9Y546 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.31□□□□□ -2.2
LRRC42Q9Y546 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
LRRC42Q9Y546 MTND4P23-201ENST00000447723 1363 ntBASIC1.31□□□□□ -2.2
LRRC42Q9Y546 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
LRRC42Q9Y546 RNU6-428P-201ENST00000362942 107 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 RNU4-91P-201ENST00000364778 135 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 RNU4-48P-201ENST00000365559 182 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 SNORD26-201ENST00000384147 75 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 RNU6-692P-201ENST00000384496 107 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 RNY3P10-201ENST00000384764 102 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 SNORA12-201ENST00000391162 147 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms