Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 RNU1-62P-201ENST00000362599 164 ntBASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 Y_RNA.81-201ENST00000362997 102 ntBASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 RNU4-84P-201ENST00000364200 139 ntBASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 RNU6-301P-201ENST00000384277 107 ntBASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 AC009963.1-201ENST00000417265 157 ntBASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 BPY2DP-201ENST00000422208 265 ntBASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 AC069285.2-201ENST00000440210 275 ntBASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 IFNA11P-201ENST00000446352 526 ntBASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 AC012308.1-201ENST00000451232 178 ntBASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 RNU6-313P-201ENST00000516317 112 ntBASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 RNU6-155P-201ENST00000516347 100 ntBASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 AC115990.1-201ENST00000526957 301 ntBASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 AC015813.4-201ENST00000610469 179 ntBASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
HCN4Q9Y3Q4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 RNU6-600P-201ENST00000362524 99 ntBASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 RNU1-20P-201ENST00000363314 162 ntBASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 RNU6-799P-201ENST00000363567 107 ntBASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 MIR1289-1-201ENST00000408836 144 ntBASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 AC019205.3-201ENST00000424573 156 ntBASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 SNRPGP5-201ENST00000456003 220 ntBASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 AC091179.3-201ENST00000474761 144 ntBASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 RPS27AP9-201ENST00000477681 438 ntBASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 RNU5F-8P-201ENST00000515941 111 ntBASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 MIR3690-201ENST00000580266 75 ntBASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 DEFB117-201ENST00000602356 141 ntBASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 AC005520.5-201ENST00000613926 164 ntBASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 MIR3674-201ENST00000636576 68 ntBASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HCN4Q9Y3Q4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 Y_RNA.215-201ENST00000364204 112 ntBASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 Y_RNA.357-201ENST00000365487 109 ntBASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 MIR128-1-201ENST00000384921 82 ntBASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 RNU6-1154P-201ENST00000391001 104 ntBASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 AL357075.1-201ENST00000404107 726 ntBASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 RN7SKP156-201ENST00000410308 342 ntBASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 RNA5SP475-201ENST00000410568 110 ntBASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 BTF3P11-201ENST00000426582 477 ntBASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 Y_RNA.637-201ENST00000459424 114 ntBASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 AC084357.1-201ENST00000473404 255 ntBASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 AC090525.1-201ENST00000479116 478 ntBASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 AC099522.1-202ENST00000514718 367 ntBASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 RNU2-58P-201ENST00000516403 183 ntBASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 SNORA31.16-201ENST00000516773 139 ntBASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 CYP4A27P-201ENST00000567218 190 ntBASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 AC091895.1-201ENST00000624494 256 ntBASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.38□□□□□ -1.71
HCN4Q9Y3Q4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 CPHL1P-201ENST00000461341 3407 ntBASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 MIR448-201ENST00000362131 111 ntBASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 Y_RNA.412-201ENST00000384001 104 ntBASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 Y_RNA.510-201ENST00000384511 114 ntBASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 RNU6-417P-201ENST00000384712 107 ntBASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 RNU6-1168P-201ENST00000390831 104 ntBASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 Y_RNA.586-201ENST00000391146 98 ntBASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 RNA5SP129-201ENST00000410276 118 ntBASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 RNU2-2P-201ENST00000410396 191 ntBASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 RNU6-735P-201ENST00000410612 107 ntBASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 Z74021.1-201ENST00000423610 407 ntBASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 CYCSP35-201ENST00000451978 304 ntBASIC4.37□□□□□ -1.71
HCN4Q9Y3Q4 RN7SL293P-201ENST00000481765 281 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms