Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 MIR3618-201ENST00000580330 88 ntBASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 MIR5583-1-201ENST00000580941 59 ntBASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 AC010928.2-201ENST00000588017 287 ntBASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 RMST_6.1-201ENST00000611980 203 ntBASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 AC078883.4-201ENST00000623218 367 ntBASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 AC092268.1-201ENST00000342691 405 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 RNU6-827P-201ENST00000365553 106 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 RNU6-160P-201ENST00000384591 107 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 RNA5SP201-201ENST00000410316 124 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 AL590135.1-201ENST00000422215 156 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 AC019205.3-201ENST00000424573 156 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 AL356320.1-201ENST00000429616 163 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 AL133396.1-201ENST00000432048 687 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 AC016700.2-201ENST00000446011 156 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 AL035666.1-201ENST00000446195 348 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 PPP1R2P5-201ENST00000457256 603 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 RNU6-956P-201ENST00000458868 103 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 RNU7-63P-201ENST00000459054 62 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 RNU7-180P-201ENST00000459240 63 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 SNRPGP7-201ENST00000469016 106 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 AC015911.1-201ENST00000495111 156 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 AC098862.1-201ENST00000504991 413 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 AK3P2-201ENST00000507976 429 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 CBX3P4-201ENST00000538909 354 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 AC103996.1-201ENST00000555468 102 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 AC110760.3-201ENST00000598794 467 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 Z99497.2-201ENST00000603634 310 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 AL391646.1-201ENST00000603860 190 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 MIR92B-201ENST00000607575 96 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 U2.17-201ENST00000611454 95 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 Z69908.1-201ENST00000622603 247 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 MTND4P14-201ENST00000435799 1354 ntBASIC1.55□□□□□ -2.16
KCNIP3Q9Y2W7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 RNU4-56P-201ENST00000364700 142 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 Y_RNA.332-201ENST00000365271 113 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 XGY1-201ENST00000381172 446 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 RNU6-26P-201ENST00000383985 107 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 SNORA48.1-201ENST00000390879 135 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 AC068050.1-201ENST00000394891 380 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 AL033519.2-201ENST00000403958 392 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 RNU2-20P-201ENST00000410425 191 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 MTCYBP8-201ENST00000422855 651 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 MTCO2P19-201ENST00000427513 598 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 AC092017.2-201ENST00000427600 362 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 AC073464.1-201ENST00000429823 534 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 AC073415.1-201ENST00000449240 153 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 AC096745.1-201ENST00000509945 370 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 AC107393.1-201ENST00000512403 346 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 RNA5SP490-201ENST00000517141 136 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 AC087441.2-201ENST00000529141 262 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 AP000873.5-201ENST00000533906 236 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 HSPE1P4-201ENST00000550617 308 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 AC090115.3-201ENST00000553218 849 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 HSBP1P1-201ENST00000555205 166 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 MIR4419B-201ENST00000577260 68 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 MIR3169-201ENST00000578032 83 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 AC103810.8-201ENST00000607347 118 ntBASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.16
KCNIP3Q9Y2W7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 AP000568.1-201ENST00000282964 442 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 CBX3P1-201ENST00000325243 554 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 RNU6-23P-201ENST00000363283 107 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 RNA5SP493-201ENST00000364115 91 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 U3.12-201ENST00000364498 214 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 RNU6-996P-201ENST00000365438 107 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 MIR491-201ENST00000384877 84 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 VN1R108P-201ENST00000431580 830 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 AL445646.1-201ENST00000431784 216 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 HSPE1P21-201ENST00000438283 308 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 AP001486.1-201ENST00000463339 476 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 AC016632.1-201ENST00000503994 196 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 AC010493.1-201ENST00000513479 292 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 MIR449C-201ENST00000516047 92 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 AL158211.1-201ENST00000566763 763 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 AC073648.5-201ENST00000603502 305 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 AC012507.3-201ENST00000603556 477 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms