Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 RNU5E-9P-201ENST00000411164 104 ntBASIC4.51□□□□□ -1.69
NOD1Q9Y239 AL451074.5-201ENST00000415894 435 ntBASIC4.51□□□□□ -1.69
NOD1Q9Y239 BTF3P11-201ENST00000426582 477 ntBASIC4.51□□□□□ -1.69
NOD1Q9Y239 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.51□□□□□ -1.69
NOD1Q9Y239 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.51□□□□□ -1.69
NOD1Q9Y239 AC107626.1-201ENST00000471084 183 ntBASIC4.51□□□□□ -1.69
NOD1Q9Y239 RNU1-61P-201ENST00000516107 151 ntBASIC4.51□□□□□ -1.69
NOD1Q9Y239 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.51□□□□□ -1.69
NOD1Q9Y239 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.51□□□□□ -1.69
NOD1Q9Y239 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.51□□□□□ -1.69
NOD1Q9Y239 HSPE1P7-201ENST00000604681 321 ntBASIC4.51□□□□□ -1.69
NOD1Q9Y239 AL008718.3-201ENST00000610217 321 ntBASIC4.51□□□□□ -1.69
NOD1Q9Y239 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.51□□□□□ -1.69
NOD1Q9Y239 AC012442.3-202ENST00000636742 206 ntBASIC4.51□□□□□ -1.69
NOD1Q9Y239 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NOD1Q9Y239 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.51□□□□□ -1.69
NOD1Q9Y239 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.51□□□□□ -1.69
NOD1Q9Y239 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.5□□□□□ -1.69
NOD1Q9Y239 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.5□□□□□ -1.69
NOD1Q9Y239 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.5□□□□□ -1.69
NOD1Q9Y239 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.5□□□□□ -1.69
NOD1Q9Y239 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.5□□□□□ -1.69
NOD1Q9Y239 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.5□□□□□ -1.69
NOD1Q9Y239 RNU6-1272P-201ENST00000362776 107 ntBASIC4.5□□□□□ -1.69
NOD1Q9Y239 RNU6-1081P-201ENST00000384537 107 ntBASIC4.5□□□□□ -1.69
NOD1Q9Y239 Y_RNA.571-201ENST00000384753 98 ntBASIC4.5□□□□□ -1.69
NOD1Q9Y239 RNU6-1248P-201ENST00000391096 64 ntBASIC4.5□□□□□ -1.69
NOD1Q9Y239 HSPE1P26-201ENST00000405341 275 ntBASIC4.5□□□□□ -1.69
NOD1Q9Y239 AC009963.1-201ENST00000417265 157 ntBASIC4.5□□□□□ -1.69
NOD1Q9Y239 RPL23AP82-202ENST00000427528 469 ntBASIC4.5□□□□□ -1.69
NOD1Q9Y239 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.5□□□□□ -1.69
NOD1Q9Y239 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.5□□□□□ -1.69
NOD1Q9Y239 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.5□□□□□ -1.69
NOD1Q9Y239 ABCF2P2-201ENST00000450549 296 ntBASIC4.5□□□□□ -1.69
NOD1Q9Y239 AC103975.1-201ENST00000482506 483 ntBASIC4.5□□□□□ -1.69
NOD1Q9Y239 RNU5F-2P-201ENST00000516066 82 ntBASIC4.5□□□□□ -1.69
NOD1Q9Y239 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.5□□□□□ -1.69
NOD1Q9Y239 AP002001.1-203ENST00000534002 267 ntBASIC4.5□□□□□ -1.69
NOD1Q9Y239 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.5□□□□□ -1.69
NOD1Q9Y239 MIR3923-201ENST00000579521 83 ntBASIC4.5□□□□□ -1.69
NOD1Q9Y239 AC005520.5-201ENST00000613926 164 ntBASIC4.5□□□□□ -1.69
NOD1Q9Y239 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NOD1Q9Y239 AC005086.4-201ENST00000623065 213 ntBASIC4.5□□□□□ -1.69
NOD1Q9Y239 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.5□□□□□ -1.69
NOD1Q9Y239 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NOD1Q9Y239 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
NOD1Q9Y239 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.5□□□□□ -1.69
NOD1Q9Y239 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.49□□□□□ -1.69
NOD1Q9Y239 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NOD1Q9Y239 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
NOD1Q9Y239 Y_RNA.333-201ENST00000365274 102 ntBASIC4.49□□□□□ -1.69
NOD1Q9Y239 RNU6-81P-201ENST00000365608 104 ntBASIC4.49□□□□□ -1.69
NOD1Q9Y239 SNORA1.3-201ENST00000384676 136 ntBASIC4.49□□□□□ -1.69
NOD1Q9Y239 CBX3P9-201ENST00000402326 552 ntBASIC4.49□□□□□ -1.69
NOD1Q9Y239 AL133475.1-201ENST00000404414 305 ntBASIC4.49□□□□□ -1.69
NOD1Q9Y239 RN7SKP156-201ENST00000410308 342 ntBASIC4.49□□□□□ -1.69
NOD1Q9Y239 RNU2-37P-201ENST00000410695 177 ntBASIC4.49□□□□□ -1.69
NOD1Q9Y239 CYCSP48-201ENST00000417124 323 ntBASIC4.49□□□□□ -1.69
NOD1Q9Y239 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.49□□□□□ -1.69
NOD1Q9Y239 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NOD1Q9Y239 HMGN2P16-201ENST00000456802 261 ntBASIC4.49□□□□□ -1.69
NOD1Q9Y239 AC140059.1-201ENST00000489238 361 ntBASIC4.49□□□□□ -1.69
NOD1Q9Y239 RN7SL323P-201ENST00000494712 295 ntBASIC4.49□□□□□ -1.69
NOD1Q9Y239 RNA5SP360-201ENST00000516555 118 ntBASIC4.49□□□□□ -1.69
NOD1Q9Y239 CYCSP30-201ENST00000546447 172 ntBASIC4.49□□□□□ -1.69
NOD1Q9Y239 AL121772.2-201ENST00000614331 297 ntBASIC4.49□□□□□ -1.69
NOD1Q9Y239 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
NOD1Q9Y239 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NOD1Q9Y239 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NOD1Q9Y239 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.49□□□□□ -1.69
NOD1Q9Y239 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NOD1Q9Y239 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.48□□□□□ -1.69
NOD1Q9Y239 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NOD1Q9Y239 Y_RNA.272-201ENST00000364696 102 ntBASIC4.48□□□□□ -1.69
NOD1Q9Y239 SNORD116-18-201ENST00000383961 92 ntBASIC4.48□□□□□ -1.69
NOD1Q9Y239 RNU6-19P-201ENST00000384718 107 ntBASIC4.48□□□□□ -1.69
NOD1Q9Y239 MIR30B-201ENST00000384850 88 ntBASIC4.48□□□□□ -1.69
NOD1Q9Y239 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NOD1Q9Y239 PTGES3P4-201ENST00000426243 356 ntBASIC4.48□□□□□ -1.69
NOD1Q9Y239 AL353748.1-201ENST00000440753 474 ntBASIC4.48□□□□□ -1.69
NOD1Q9Y239 AL133393.1-201ENST00000603277 287 ntBASIC4.48□□□□□ -1.69
NOD1Q9Y239 AC006380.1-201ENST00000603598 186 ntBASIC4.48□□□□□ -1.69
NOD1Q9Y239 SNORA51-201ENST00000606420 132 ntBASIC4.48□□□□□ -1.69
NOD1Q9Y239 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NOD1Q9Y239 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.48□□□□□ -1.69
NOD1Q9Y239 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NOD1Q9Y239 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
NOD1Q9Y239 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NOD1Q9Y239 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NOD1Q9Y239 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.47□□□□□ -1.69
NOD1Q9Y239 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.47□□□□□ -1.69
NOD1Q9Y239 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.47□□□□□ -1.69
NOD1Q9Y239 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NOD1Q9Y239 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.47□□□□□ -1.69
NOD1Q9Y239 MIR208A-201ENST00000362287 71 ntBASIC4.47□□□□□ -1.69
NOD1Q9Y239 SNORA63.1-201ENST00000362493 131 ntBASIC4.47□□□□□ -1.69
NOD1Q9Y239 RNA5SP124-201ENST00000362739 110 ntBASIC4.47□□□□□ -1.69
NOD1Q9Y239 RNA5SP97-201ENST00000365006 84 ntBASIC4.47□□□□□ -1.69
NOD1Q9Y239 Y_RNA.329-201ENST00000365209 107 ntBASIC4.47□□□□□ -1.69
NOD1Q9Y239 RNU6-1130P-201ENST00000365434 107 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 232.2 ms