Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AL136363.2-201ENST00000604173 851 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AC018926.1-201ENST00000616335 435 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AL590240.4-201ENST00000616908 390 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 AC007742.2-201ENST00000618226 398 ntBASIC0.66□□□□□ -2.3
SCN8AQ9UQD0 RNU6-1187P-201ENST00000364771 110 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 MIR193B-201ENST00000384907 83 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 MTND4P20-201ENST00000424125 869 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 USP9YP35-201ENST00000435696 412 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 MTND1P30-201ENST00000441241 901 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 AC104629.1-201ENST00000494226 508 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 AC105313.1-201ENST00000509121 353 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 RNU7-40P-201ENST00000516397 64 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 AC091163.3-201ENST00000518269 1144 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 AC092451.2-201ENST00000538746 658 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 HMGB1P33-201ENST00000563485 527 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 AC091948.2-201ENST00000636510 279 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 MIR608-201ENST00000384820 100 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 AL161935.2-201ENST00000414627 60 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 C8orf59P1-201ENST00000429930 303 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 PGBD4P5-201ENST00000445958 426 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 SNORA3.4-201ENST00000515969 96 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 CYP3A52P-201ENST00000563326 91 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 AC092325.1-201ENST00000566449 554 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 AL355816.2-201ENST00000610049 647 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 AC245297.2-201ENST00000610119 565 ntBASIC0.65□□□□□ -2.31
SCN8AQ9UQD0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
SCN8AQ9UQD0 AC008163.1-202ENST00000636004 2889 ntBASIC0.64□□□□□ -2.31
SCN8AQ9UQD0 RNY3P13-201ENST00000365542 102 ntBASIC0.64□□□□□ -2.31
SCN8AQ9UQD0 RNU6-968P-201ENST00000384076 107 ntBASIC0.64□□□□□ -2.31
SCN8AQ9UQD0 MIR520A-201ENST00000384862 85 ntBASIC0.64□□□□□ -2.31
SCN8AQ9UQD0 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.64□□□□□ -2.31
SCN8AQ9UQD0 AC005534.2-201ENST00000431047 433 ntBASIC0.64□□□□□ -2.31
SCN8AQ9UQD0 AC092628.1-201ENST00000436250 252 ntBASIC0.64□□□□□ -2.31
SCN8AQ9UQD0 FRG1KP-201ENST00000623592 341 ntBASIC0.64□□□□□ -2.31
SCN8AQ9UQD0 MIR6866-201ENST00000638146 69 ntBASIC0.64□□□□□ -2.31
SCN8AQ9UQD0 Y_RNA.33-201ENST00000362591 102 ntBASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 MTCO1P21-201ENST00000416634 589 ntBASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 MTCO3P28-201ENST00000513351 515 ntBASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 RNA5SP437-201ENST00000517249 129 ntBASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 AP006587.4-201ENST00000526053 529 ntBASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 BNIP3P26-201ENST00000600827 554 ntBASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 VN1R82P-201ENST00000601481 356 ntBASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 AC068880.4-201ENST00000623082 495 ntBASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 AL589743.1-201ENST00000551932 2712 ntBASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 AL669831.1-202ENST00000428504 417 ntBASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 RNU5A-4P-201ENST00000516588 111 ntBASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 RNU6-914P-201ENST00000516749 109 ntBASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 AC002400.1-201ENST00000569310 726 ntBASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 MTND3P13-201ENST00000574391 343 ntBASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 MIR4661-201ENST00000582720 75 ntBASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 AL391001.1-201ENST00000602747 715 ntBASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 AC008945.2-201ENST00000606056 604 ntBASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 U6.42-201ENST00000618440 107 ntBASIC0.63□□□□□ -2.31
SCN8AQ9UQD0 SNORD3E-201ENST00000362899 217 ntBASIC0.62□□□□□ -2.31
SCN8AQ9UQD0 RNU6-1235P-201ENST00000384559 107 ntBASIC0.62□□□□□ -2.31
SCN8AQ9UQD0 RNA5SP193-201ENST00000410353 107 ntBASIC0.62□□□□□ -2.31
SCN8AQ9UQD0 RNU6-1245P-201ENST00000411130 106 ntBASIC0.62□□□□□ -2.31
SCN8AQ9UQD0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.62□□□□□ -2.31
SCN8AQ9UQD0 PIGFP2-201ENST00000421400 651 ntBASIC0.62□□□□□ -2.31
SCN8AQ9UQD0 MTCO2P1-201ENST00000424648 477 ntBASIC0.62□□□□□ -2.31
SCN8AQ9UQD0 AL589872.1-201ENST00000426602 288 ntBASIC0.62□□□□□ -2.31
SCN8AQ9UQD0 AC013262.1-201ENST00000426710 252 ntBASIC0.62□□□□□ -2.31
SCN8AQ9UQD0 LARP1BP3-201ENST00000437229 869 ntBASIC0.62□□□□□ -2.31
SCN8AQ9UQD0 RNU6-498P-201ENST00000459468 107 ntBASIC0.62□□□□□ -2.31
SCN8AQ9UQD0 AC109445.1-201ENST00000512356 383 ntBASIC0.62□□□□□ -2.31
SCN8AQ9UQD0 RNU6-677P-201ENST00000516914 101 ntBASIC0.62□□□□□ -2.31
SCN8AQ9UQD0 MIR4711-201ENST00000578274 70 ntBASIC0.62□□□□□ -2.31
SCN8AQ9UQD0 AC112220.3-201ENST00000605502 502 ntBASIC0.62□□□□□ -2.31
SCN8AQ9UQD0 AC009229.3-201ENST00000608056 282 ntBASIC0.62□□□□□ -2.31
SCN8AQ9UQD0 AC091925.1-201ENST00000623204 462 ntBASIC0.62□□□□□ -2.31
SCN8AQ9UQD0 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 MIR100-201ENST00000385259 80 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 RNU6-1054P-201ENST00000411293 104 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 AC113347.3-201ENST00000509113 148 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 RN7SKP88-201ENST00000516847 250 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 AC087894.1-201ENST00000538359 518 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms