Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MIR3199-2-201ENST00000636243 86 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 AL356274.2-201ENST00000624379 3752 ntBASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PPARGC1AQ9UBK2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 AC093908.1-201ENST00000623125 8092 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-212P-201ENST00000362642 104 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-1301P-201ENST00000362724 104 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 RN7SKP111-201ENST00000410349 271 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 RN7SKP58-201ENST00000411010 305 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 AC245291.1-201ENST00000419501 328 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 AC096920.1-201ENST00000423991 241 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 RPL21P129-201ENST00000491732 478 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 AF186996.7-201ENST00000492781 209 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 RPS23P5-201ENST00000495419 428 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 AC110768.1-201ENST00000509222 400 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-1114P-201ENST00000516022 107 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 SNORA31.6-201ENST00000516241 130 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-1012P-201ENST00000516606 109 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-388P-201ENST00000517012 105 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-389P-201ENST00000517048 105 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 TGIF1P1-201ENST00000558095 802 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 AC021231.3-201ENST00000558497 370 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 AL442067.1-201ENST00000613261 223 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 AC103988.1-201ENST00000566382 2177 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 AC068647.1-201ENST00000489539 2265 ntBASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.63□□□□□ -1.83
PPARGC1AQ9UBK2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 LINC02555-201ENST00000563933 1951 ntBASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 MIR335-201ENST00000362173 94 ntBASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 RNU1-140P-201ENST00000365040 165 ntBASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 MIR32-201ENST00000384965 70 ntBASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 MIR218-2-201ENST00000385006 110 ntBASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 MRPL35P1-201ENST00000404272 572 ntBASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 RN7SKP27-201ENST00000410684 333 ntBASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 AC009310.1-201ENST00000414414 451 ntBASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 AL031183.1-201ENST00000457667 207 ntBASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 AP001025.1-201ENST00000486139 332 ntBASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 AC091874.1-201ENST00000511402 339 ntBASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 ACA59.2-201ENST00000517061 156 ntBASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 AC026333.2-201ENST00000542164 106 ntBASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 MIR4444-1-201ENST00000581696 74 ntBASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 MIR4444-2-201ENST00000584390 74 ntBASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 AL133393.1-201ENST00000603277 287 ntBASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 AC141273.2-201ENST00000618989 130 ntBASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PPARGC1AQ9UBK2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 AL021368.2-201ENST00000606125 5352 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 SNORD81.1-201ENST00000363064 77 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 SNORA14A-201ENST00000364773 135 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-622P-201ENST00000384272 103 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 MIR544A-201ENST00000384855 91 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 SNORD115-46-201ENST00000390982 71 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 SNORA26.3-201ENST00000391119 136 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-121P-201ENST00000410525 99 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 RNU2-38P-201ENST00000410856 79 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 RPS29P4-201ENST00000414733 161 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 EIF1P2-201ENST00000428233 350 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 AC005300.1-201ENST00000428401 373 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 ARL5AP4-201ENST00000430731 512 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 AL714022.1-201ENST00000439897 151 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 AP002884.2-201ENST00000471647 395 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-581P-201ENST00000516214 105 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 HSPE1P4-201ENST00000550617 308 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 AC090897.2-201ENST00000581715 130 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 AL138963.2-201ENST00000605137 226 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 AC096772.1-201ENST00000609146 564 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 MIR376A1-201ENST00000616574 68 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms