Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 Y_RNA.641-201ENST00000459414 105 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 RN7SL542P-201ENST00000467147 294 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.23□□□□□ -1.73
CNTN3Q9P232 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.23□□□□□ -1.73
CNTN3Q9P232 RNU6-581P-201ENST00000516214 105 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.23□□□□□ -1.73
CNTN3Q9P232 MIR3144-201ENST00000579460 79 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.23□□□□□ -1.73
CNTN3Q9P232 AC090897.2-201ENST00000581715 130 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 MIR3609-201ENST00000582661 80 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.23□□□□□ -1.73
CNTN3Q9P232 AC004832.4-201ENST00000608952 331 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 AC034229.5-201ENST00000624258 185 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 AL136164.4-201ENST00000625013 2135 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 MTND5P35-201ENST00000557537 1720 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.23□□□□□ -1.73
CNTN3Q9P232 AL359854.1-201ENST00000614203 1594 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CNTN3Q9P232 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CNTN3Q9P232 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CNTN3Q9P232 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.22□□□□□ -1.73
CNTN3Q9P232 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CNTN3Q9P232 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CNTN3Q9P232 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CNTN3Q9P232 RNU6-923P-201ENST00000364753 107 ntBASIC4.22□□□□□ -1.73
CNTN3Q9P232 U1.1-201ENST00000384101 164 ntBASIC4.22□□□□□ -1.73
CNTN3Q9P232 MIR199A2-201ENST00000385289 110 ntBASIC4.22□□□□□ -1.73
CNTN3Q9P232 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.22□□□□□ -1.73
CNTN3Q9P232 snoU13.6-201ENST00000458785 104 ntBASIC4.22□□□□□ -1.73
CNTN3Q9P232 RNU6-625P-201ENST00000459412 107 ntBASIC4.22□□□□□ -1.73
CNTN3Q9P232 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.22□□□□□ -1.73
CNTN3Q9P232 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.22□□□□□ -1.73
CNTN3Q9P232 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.22□□□□□ -1.73
CNTN3Q9P232 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.22□□□□□ -1.73
CNTN3Q9P232 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.22□□□□□ -1.73
CNTN3Q9P232 AP001485.1-201ENST00000604799 199 ntBASIC4.22□□□□□ -1.73
CNTN3Q9P232 AC108706.1-201ENST00000611053 297 ntBASIC4.22□□□□□ -1.73
CNTN3Q9P232 AL357075.2-201ENST00000614906 189 ntBASIC4.22□□□□□ -1.73
CNTN3Q9P232 AC068831.7-201ENST00000616954 363 ntBASIC4.22□□□□□ -1.73
CNTN3Q9P232 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CNTN3Q9P232 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
CNTN3Q9P232 BX322639.1-202ENST00000423987 2213 ntBASIC4.22□□□□□ -1.73
CNTN3Q9P232 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CNTN3Q9P232 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CNTN3Q9P232 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
CNTN3Q9P232 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CNTN3Q9P232 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CNTN3Q9P232 RNU6-622P-201ENST00000384272 103 ntBASIC4.21□□□□□ -1.74
CNTN3Q9P232 Y_RNA.498-201ENST00000384460 102 ntBASIC4.21□□□□□ -1.74
CNTN3Q9P232 MIR30B-201ENST00000384850 88 ntBASIC4.21□□□□□ -1.74
CNTN3Q9P232 RNU6-1248P-201ENST00000391096 64 ntBASIC4.21□□□□□ -1.74
CNTN3Q9P232 MIR320B2-201ENST00000408479 138 ntBASIC4.21□□□□□ -1.74
CNTN3Q9P232 AC138623.1-201ENST00000418060 216 ntBASIC4.21□□□□□ -1.74
CNTN3Q9P232 AL445584.1-201ENST00000431451 330 ntBASIC4.21□□□□□ -1.74
CNTN3Q9P232 RPL23AP3-201ENST00000453844 468 ntBASIC4.21□□□□□ -1.74
CNTN3Q9P232 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.21□□□□□ -1.74
CNTN3Q9P232 RPL31P61-201ENST00000496160 376 ntBASIC4.21□□□□□ -1.74
CNTN3Q9P232 AC006445.2-201ENST00000510061 472 ntBASIC4.21□□□□□ -1.74
CNTN3Q9P232 SCARNA14-201ENST00000516903 136 ntBASIC4.21□□□□□ -1.74
CNTN3Q9P232 AC018448.1-201ENST00000552843 316 ntBASIC4.21□□□□□ -1.74
CNTN3Q9P232 GNRHR2P1-201ENST00000555315 631 ntBASIC4.21□□□□□ -1.74
CNTN3Q9P232 AC087499.8-201ENST00000578406 226 ntBASIC4.21□□□□□ -1.74
CNTN3Q9P232 AC005828.6-201ENST00000606610 232 ntBASIC4.21□□□□□ -1.74
CNTN3Q9P232 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.21□□□□□ -1.74
CNTN3Q9P232 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.21□□□□□ -1.74
CNTN3Q9P232 AL138880.2-201ENST00000616214 239 ntBASIC4.21□□□□□ -1.74
CNTN3Q9P232 AC006111.3-201ENST00000622137 383 ntBASIC4.21□□□□□ -1.74
CNTN3Q9P232 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CNTN3Q9P232 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
CNTN3Q9P232 AL161912.2-201ENST00000565707 3007 ntBASIC4.21□□□□□ -1.74
CNTN3Q9P232 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CNTN3Q9P232 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTN3Q9P232 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTN3Q9P232 AC002543.1-201ENST00000299783 1954 ntBASIC4.2□□□□□ -1.74
CNTN3Q9P232 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTN3Q9P232 Y_RNA.308-201ENST00000365043 101 ntBASIC4.2□□□□□ -1.74
CNTN3Q9P232 RNU6-793P-201ENST00000384233 104 ntBASIC4.2□□□□□ -1.74
CNTN3Q9P232 MIR554-201ENST00000384874 96 ntBASIC4.2□□□□□ -1.74
CNTN3Q9P232 SNORA3.3-201ENST00000408712 125 ntBASIC4.2□□□□□ -1.74
CNTN3Q9P232 RN7SKP27-201ENST00000410684 333 ntBASIC4.2□□□□□ -1.74
CNTN3Q9P232 AC099548.1-201ENST00000421443 426 ntBASIC4.2□□□□□ -1.74
CNTN3Q9P232 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.2□□□□□ -1.74
CNTN3Q9P232 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.2□□□□□ -1.74
CNTN3Q9P232 RNU6-928P-201ENST00000516876 104 ntBASIC4.2□□□□□ -1.74
CNTN3Q9P232 ACA59.2-201ENST00000517061 156 ntBASIC4.2□□□□□ -1.74
CNTN3Q9P232 RNU1-45P-201ENST00000517191 141 ntBASIC4.2□□□□□ -1.74
CNTN3Q9P232 HIGD1AP1-201ENST00000550979 275 ntBASIC4.2□□□□□ -1.74
CNTN3Q9P232 MIR5692C2-201ENST00000577959 77 ntBASIC4.2□□□□□ -1.74
CNTN3Q9P232 MIR3136-201ENST00000583498 78 ntBASIC4.2□□□□□ -1.74
CNTN3Q9P232 AL078605.1-201ENST00000603529 500 ntBASIC4.2□□□□□ -1.74
CNTN3Q9P232 AC099654.7-201ENST00000635788 2127 ntBASIC4.2□□□□□ -1.74
CNTN3Q9P232 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CNTN3Q9P232 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTN3Q9P232 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTN3Q9P232 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTN3Q9P232 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.2□□□□□ -1.74
CNTN3Q9P232 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTN3Q9P232 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CNTN3Q9P232 AC092593.1-201ENST00000515413 1815 ntBASIC4.19□□□□□ -1.74
CNTN3Q9P232 RNU4-56P-201ENST00000364700 142 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms