Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.24□□□□□ -1.89
MKS1Q9NXB0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
MKS1Q9NXB0 RNU6-1210P-201ENST00000363775 107 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 SNORD115-32-201ENST00000364079 82 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 Y_RNA.314-201ENST00000365114 102 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.24□□□□□ -1.89
MKS1Q9NXB0 MIR625-201ENST00000385047 85 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 AC092423.1-201ENST00000430165 186 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 MICF-203ENST00000432679 129 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.24□□□□□ -1.89
MKS1Q9NXB0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.24□□□□□ -1.89
MKS1Q9NXB0 GSTA11P-201ENST00000452866 669 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.24□□□□□ -1.89
MKS1Q9NXB0 AL121594.1-201ENST00000475906 575 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.24□□□□□ -1.89
MKS1Q9NXB0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.24□□□□□ -1.89
MKS1Q9NXB0 RNU2-53P-201ENST00000516257 147 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 RNU6-567P-201ENST00000516746 107 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 RNU7-4P-201ENST00000516961 62 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 AC023442.1-201ENST00000531247 422 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.24□□□□□ -1.89
MKS1Q9NXB0 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.24□□□□□ -1.89
MKS1Q9NXB0 AC103810.1-201ENST00000579873 453 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 AL020997.2-201ENST00000602607 184 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 Z98751.3-201ENST00000604447 521 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 AC100812.1-201ENST00000607622 580 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.24□□□□□ -1.89
MKS1Q9NXB0 AC083806.3-201ENST00000614016 455 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 AC091903.1-201ENST00000624322 454 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
MKS1Q9NXB0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
MKS1Q9NXB0 AL161912.2-201ENST00000565707 3007 ntBASIC3.24□□□□□ -1.89
MKS1Q9NXB0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
MKS1Q9NXB0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
MKS1Q9NXB0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.23□□□□□ -1.89
MKS1Q9NXB0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.23□□□□□ -1.89
MKS1Q9NXB0 Y_RNA.148-201ENST00000363557 117 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 SNORD56.5-201ENST00000364281 72 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 SNORA33.2-201ENST00000365413 134 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 RPL21P75-201ENST00000396599 483 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 MIR190B-201ENST00000401119 79 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 RPL21P28-201ENST00000401418 483 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 AC012306.1-201ENST00000423267 114 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 RPS12P18-201ENST00000442381 270 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.23□□□□□ -1.89
MKS1Q9NXB0 RPL21P39-201ENST00000463605 483 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 AC087190.1-201ENST00000484462 480 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 AC093591.1-201ENST00000491435 481 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 RPL21P129-201ENST00000491732 478 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 RPL21P16-201ENST00000495531 483 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.23□□□□□ -1.89
MKS1Q9NXB0 AC108043.1-201ENST00000512696 574 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 Y_RNA.706-201ENST00000516933 99 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.23□□□□□ -1.89
MKS1Q9NXB0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.23□□□□□ -1.89
MKS1Q9NXB0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.23□□□□□ -1.89
MKS1Q9NXB0 AC092447.9-201ENST00000603395 144 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 AL034555.1-201ENST00000604816 211 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 AC016925.2-201ENST00000605108 242 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 AL355802.3-201ENST00000607571 545 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 RMST_6.1-201ENST00000611980 203 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.23□□□□□ -1.89
MKS1Q9NXB0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.23□□□□□ -1.89
MKS1Q9NXB0 AC137590.2-201ENST00000619709 240 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 AC008264.2-201ENST00000610193 3731 ntBASIC3.23□□□□□ -1.89
MKS1Q9NXB0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.23□□□□□ -1.89
MKS1Q9NXB0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
MKS1Q9NXB0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
MKS1Q9NXB0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
MKS1Q9NXB0 RNU6-874P-201ENST00000362390 105 ntBASIC3.22□□□□□ -1.89
MKS1Q9NXB0 Y_RNA.126-201ENST00000363382 111 ntBASIC3.22□□□□□ -1.89
MKS1Q9NXB0 RNU4-56P-201ENST00000364700 142 ntBASIC3.22□□□□□ -1.89
MKS1Q9NXB0 RNU6-1032P-201ENST00000384100 107 ntBASIC3.22□□□□□ -1.89
MKS1Q9NXB0 CBX3P9-201ENST00000402326 552 ntBASIC3.22□□□□□ -1.89
MKS1Q9NXB0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.22□□□□□ -1.89
MKS1Q9NXB0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.22□□□□□ -1.89
MKS1Q9NXB0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.22□□□□□ -1.89
MKS1Q9NXB0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.22□□□□□ -1.89
MKS1Q9NXB0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.22□□□□□ -1.89
MKS1Q9NXB0 SNORA25.10-201ENST00000515926 124 ntBASIC3.22□□□□□ -1.89
MKS1Q9NXB0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.22□□□□□ -1.89
MKS1Q9NXB0 AC106785.1-201ENST00000565935 262 ntBASIC3.22□□□□□ -1.89
MKS1Q9NXB0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.22□□□□□ -1.89
MKS1Q9NXB0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.22□□□□□ -1.89
MKS1Q9NXB0 AC087588.2-201ENST00000617667 426 ntBASIC3.22□□□□□ -1.89
MKS1Q9NXB0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.22□□□□□ -1.89
MKS1Q9NXB0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
MKS1Q9NXB0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.22□□□□□ -1.89
MKS1Q9NXB0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
MKS1Q9NXB0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
MKS1Q9NXB0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
MKS1Q9NXB0 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.89
MKS1Q9NXB0 RNU4-35P-201ENST00000362588 141 ntBASIC3.21□□□□□ -1.9
MKS1Q9NXB0 RNU6-17P-201ENST00000384245 107 ntBASIC3.21□□□□□ -1.9
MKS1Q9NXB0 RNU6-18P-201ENST00000384527 107 ntBASIC3.21□□□□□ -1.9
MKS1Q9NXB0 MIR32-201ENST00000384965 70 ntBASIC3.21□□□□□ -1.9
MKS1Q9NXB0 AL445584.1-201ENST00000431451 330 ntBASIC3.21□□□□□ -1.9
MKS1Q9NXB0 AP000705.1-201ENST00000454567 350 ntBASIC3.21□□□□□ -1.9
MKS1Q9NXB0 snoU13.6-201ENST00000458785 104 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms