Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 MIR181A1-201ENST00000385026 110 ntBASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 EIF4E2P1-201ENST00000393781 255 ntBASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 CALM2P3-201ENST00000400429 449 ntBASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 RN7SKP284-201ENST00000411002 343 ntBASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 SRIP3-201ENST00000413200 219 ntBASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 RNU6-717P-201ENST00000459076 104 ntBASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 RNU6-1037P-201ENST00000459571 107 ntBASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 SNORA19.2-201ENST00000516013 114 ntBASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 AC243972.3-201ENST00000539655 198 ntBASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 AC027807.1-201ENST00000559921 996 ntBASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 AL031274.2-201ENST00000599419 203 ntBASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 AP001836.1-201ENST00000604675 523 ntBASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 AC103591.3-201ENST00000608684 209 ntBASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 AC008555.8-201ENST00000623602 2168 ntBASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 SNORD98-201ENST00000636377 67 ntBASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CHCHD3Q9NX63 snoU2_19.1-201ENST00000362361 80 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 Y_RNA.111-201ENST00000363248 100 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 Y_RNA.231-201ENST00000364358 102 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 Y_RNA.381-201ENST00000365666 102 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 Y_RNA.409-201ENST00000383990 98 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 HMGN2P39-201ENST00000398005 273 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 RNA5SP338-201ENST00000410495 85 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 AC105272.1-201ENST00000438604 198 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 AC107032.1-201ENST00000485945 480 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 AC010486.1-201ENST00000511793 424 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 RNU6-1281P-201ENST00000516223 105 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 RNU6-506P-201ENST00000516553 94 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 AC103996.1-201ENST00000555468 102 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 AC245505.1-201ENST00000556398 224 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 ZNF519P2-201ENST00000557032 169 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 AC021231.3-201ENST00000558497 370 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 DISC2.1-201ENST00000612827 205 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 AL132822.1-201ENST00000617063 513 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 AL136221.1-201ENST00000621449 509 ntBASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CHCHD3Q9NX63 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 SNORA5B-201ENST00000363786 132 ntBASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 RNU4-40P-201ENST00000364351 143 ntBASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 Y_RNA.436-201ENST00000384097 102 ntBASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 Y_RNA.517-201ENST00000384551 106 ntBASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 RNA5SP184-201ENST00000411071 108 ntBASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 HMGN2P19-201ENST00000425149 265 ntBASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 U8.21-201ENST00000459536 136 ntBASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 AC087884.1-201ENST00000469738 328 ntBASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 HSPE1P4-201ENST00000550617 308 ntBASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 AC004492.1-201ENST00000607036 742 ntBASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 AC092807.2-201ENST00000609367 243 ntBASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 AC092608.2-201ENST00000624427 218 ntBASIC2.19□□□□□ -2.06
CHCHD3Q9NX63 MIR21-201ENST00000362134 72 ntBASIC2.18□□□□□ -2.06
CHCHD3Q9NX63 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CHCHD3Q9NX63 AL512604.1-201ENST00000404812 257 ntBASIC2.18□□□□□ -2.06
CHCHD3Q9NX63 MTCYBP2-201ENST00000407745 171 ntBASIC2.18□□□□□ -2.06
CHCHD3Q9NX63 MIR1294-201ENST00000408503 142 ntBASIC2.18□□□□□ -2.06
CHCHD3Q9NX63 Y_RNA.597-201ENST00000410463 100 ntBASIC2.18□□□□□ -2.06
CHCHD3Q9NX63 RNU2-48P-201ENST00000410694 191 ntBASIC2.18□□□□□ -2.06
CHCHD3Q9NX63 EIF1AXP1-201ENST00000419267 435 ntBASIC2.18□□□□□ -2.06
CHCHD3Q9NX63 IFNA20P-201ENST00000436840 528 ntBASIC2.18□□□□□ -2.06
CHCHD3Q9NX63 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.18□□□□□ -2.06
CHCHD3Q9NX63 AL359672.1-201ENST00000442302 409 ntBASIC2.18□□□□□ -2.06
CHCHD3Q9NX63 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.18□□□□□ -2.06
CHCHD3Q9NX63 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.18□□□□□ -2.06
CHCHD3Q9NX63 MTND3P16-201ENST00000452205 344 ntBASIC2.18□□□□□ -2.06
CHCHD3Q9NX63 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.18□□□□□ -2.06
CHCHD3Q9NX63 TRAV32-201ENST00000553993 340 ntBASIC2.18□□□□□ -2.06
CHCHD3Q9NX63 RPL17P51-201ENST00000605218 238 ntBASIC2.18□□□□□ -2.06
CHCHD3Q9NX63 AP000654.2-201ENST00000605633 586 ntBASIC2.18□□□□□ -2.06
CHCHD3Q9NX63 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 RNU6-944P-201ENST00000364023 107 ntBASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 RNU4-20P-201ENST00000365601 151 ntBASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 RNU6-214P-201ENST00000384130 107 ntBASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 BTF3L4P2-201ENST00000392798 346 ntBASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 UBE2V1P4-201ENST00000425374 344 ntBASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 ERLEC1P1-201ENST00000433806 578 ntBASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 TRBVA-201ENST00000498804 316 ntBASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 AC107953.1-201ENST00000522216 297 ntBASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 EIF4BP1-201ENST00000554881 351 ntBASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 EIF1P4-201ENST00000572664 335 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms